RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 KELP23276 732 aa16.88■□□□□ 0.29
CPSF1-207ENST00000531727 TRIM23P36406 574 aa16.88■□□□□ 0.29
CPSF1-207ENST00000531727 UCNP55089 124 aa16.88■□□□□ 0.29
CPSF1-207ENST00000531727 TMPRSS3P57727 454 aa16.88■□□□□ 0.29
CPSF1-207ENST00000531727 PIGHQ14442 188 aaPredicted RBP16.88■□□□□ 0.29
CPSF1-207ENST00000531727 ZNF235Q14590 738 aa16.88■□□□□ 0.29
CPSF1-207ENST00000531727 TDRD12Q587J7 1177 aaKnown RBP16.88■□□□□ 0.29
CPSF1-207ENST00000531727 LSM14AQ8ND56 463 aaKnown RBP16.88■□□□□ 0.29
CPSF1-207ENST00000531727 OR6C4Q8NGE1 309 aa16.88■□□□□ 0.29
CPSF1-207ENST00000531727 WDR36Q8NI36 951 aaKnown RBP16.88■□□□□ 0.29
CPSF1-207ENST00000531727 SLC39A7Q92504 469 aa16.88■□□□□ 0.29
CPSF1-207ENST00000531727 CSPG4P5Q96PW8 444 aa16.88■□□□□ 0.29
CPSF1-207ENST00000531727 NUDCD1Q96RS6 583 aa16.88■□□□□ 0.29
CPSF1-207ENST00000531727 FGF22Q9HCT0 170 aa16.88■□□□□ 0.29
CPSF1-207ENST00000531727 B4GALT6Q9UBX8 382 aa16.88■□□□□ 0.29
CPSF1-207ENST00000531727 BZW2Q9Y6E2 419 aaKnown RBP16.88■□□□□ 0.29
CPSF1-207ENST00000531727 A0A1W2PQJ5 194 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 TTC24A2A3L6 582 aaPredicted RBP16.87■□□□□ 0.29
CPSF1-207ENST00000531727 PMS2P1A4D2B8 440 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 A8MX80 341 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 CDRT15L2A8MXV6 281 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 TNFRSF10CO14798 259 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 KLK10O43240 276 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 MAFKO60675 156 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 CPP00450 1065 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 RARAP10276 462 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 MLLT3P42568 568 aaPredicted RBP16.87■□□□□ 0.29
CPSF1-207ENST00000531727 SKOR1P84550 965 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 ACOX1Q15067 660 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 PNCKQ6P2M8 343 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 BBS5Q8N3I7 341 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 PGBD5Q8N414 524 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 NIPA2Q8N8Q9 360 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 GPR156Q8NFN8 814 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 TEKT4Q8WW24 435 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 SYN2Q92777 582 aaPredicted RBP16.87■□□□□ 0.29
CPSF1-207ENST00000531727 LIN37Q96GY3 246 aaPredicted RBP16.87■□□□□ 0.29
CPSF1-207ENST00000531727 COQ10AQ96MF6 247 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 GFM1Q96RP9 751 aaKnown RBP16.87■□□□□ 0.29
CPSF1-207ENST00000531727 MGME1Q9BQP7 344 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.87■□□□□ 0.29
CPSF1-207ENST00000531727 THAP2Q9H0W7 228 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 WDR26Q9H7D7 661 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 PCDH18Q9HCL0 1135 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 MRPL40Q9NQ50 206 aaKnown RBP16.87■□□□□ 0.29
CPSF1-207ENST00000531727 PCDHGC4Q9Y5F7 938 aa16.87■□□□□ 0.29
CPSF1-207ENST00000531727 VIPR1P32241 457 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 SERPINB6P35237 376 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 CCL7P80098 99 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 FANCCQ00597 558 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 SLC25A11Q02978 314 aaKnown RBP16.86■□□□□ 0.29
CPSF1-207ENST00000531727 CNGA3Q16281 694 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 TXNRD3NBQ6F5E7 133 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 FOXR1Q6PIV2 292 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 TAF8Q7Z7C8 310 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 CLEC14AQ86T13 490 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 PELI3Q8N2H9 469 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 ARL14Q8N4G2 192 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 ATPAF2Q8N5M1 289 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 PDCD6IPQ8WUM4 868 aaKnown RBP16.86■□□□□ 0.29
CPSF1-207ENST00000531727 LGR4Q9BXB1 951 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 NOD2Q9HC29 1040 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 KCTD5Q9NXV2 234 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 IP6K2Q9UHH9 426 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 ANAPC7Q9UJX3 599 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 PTPRQQ9UMZ3 2332 aa16.86■□□□□ 0.29
CPSF1-207ENST00000531727 A0A1W2PQM1 296 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 D6RAR5 112 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 PDE2AO00408 941 aaPredicted RBP16.85■□□□□ 0.29
CPSF1-207ENST00000531727 HEXIM1O94992 359 aaKnown RBP16.85■□□□□ 0.29
CPSF1-207ENST00000531727 TNFSF15O95150 251 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 PRB1P04280 392 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 SERPING1P05155 500 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 RPLP0P05388 317 aaKnown RBP16.85■□□□□ 0.29
CPSF1-207ENST00000531727 NFKBIAP25963 317 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 PBX1P40424 430 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 CDH6P55285 790 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 TPM4P67936 248 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 TRAF2Q12933 501 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 TSR1Q2NL82 804 aaKnown RBP16.85■□□□□ 0.29
CPSF1-207ENST00000531727 RALGPS1Q5JS13 557 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 OGFOD3Q6PK18 319 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 B3GNT8Q7Z7M8 397 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 FAM46DQ8NEK8 389 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 NSMCE1Q8WV22 266 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 NUS1Q96E22 293 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 CCDC97Q96F63 343 aaPredicted RBP16.85■□□□□ 0.29
CPSF1-207ENST00000531727 BTBD6Q96KE9 485 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 TMEM168Q9H0V1 697 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 LRRN3Q9H3W5 708 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 CBX8Q9HC52 389 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 CPNE5Q9HCH3 593 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 CYP4F12Q9HCS2 524 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 APPL1Q9UKG1 709 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 PHTF1Q9UMS5 762 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 SSUH2Q9Y2M2 353 aa16.85■□□□□ 0.29
CPSF1-207ENST00000531727 PRSS38A1L453 326 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 TMX2-CTNND1H3BSU7 103 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 NOBOXO60393 691 aa16.84■□□□□ 0.29
CPSF1-207ENST00000531727 CYP1A2P05177 515 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms