RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ACADMP11310 421 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 DRD3P35462 400 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 RPS9P46781 194 aaKnown RBP19.09■□□□□ 0.65
SMPD1-205ENST00000531303 TMPRSS15P98073 1019 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 SMAD1Q15797 465 aaKnown RBP19.09■□□□□ 0.65
SMPD1-205ENST00000531303 ERAP2Q6P179 960 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 CRTC1Q6UUV9 634 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 FAM124AQ86V42 546 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 LRRC39Q96DD0 335 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 ZNF778Q96MU6 729 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 HDAC8Q9BY41 377 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 CDC42EP4Q9H3Q1 356 aaKnown RBP19.09■□□□□ 0.65
SMPD1-205ENST00000531303 NINJ2Q9NZG7 142 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 GGT7Q9UJ14 662 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 PPIL1Q9Y3C6 166 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 LDB2O43679 373 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 CRTAMO95727 393 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 CYP2A6P11509 494 aaPredicted RBP19.09■□□□□ 0.65
SMPD1-205ENST00000531303 NMBRP28336 390 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 TAF1AQ15573 450 aaPredicted RBP19.09■□□□□ 0.65
SMPD1-205ENST00000531303 TTC31Q49AM3 519 aaPredicted RBP19.09■□□□□ 0.65
SMPD1-205ENST00000531303 PIP5KL1Q5T9C9 394 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 FBXO38Q6PIJ6 1188 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 SPEM1Q8N4L4 309 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 UHMK1Q8TAS1 419 aaKnown RBP19.09■□□□□ 0.65
SMPD1-205ENST00000531303 UBLCP1Q8WVY7 318 aaPredicted RBP19.09■□□□□ 0.65
SMPD1-205ENST00000531303 SPOCK2Q92563 424 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 CAVIN3Q969G5 261 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 ZNF669Q96BR6 464 aaPredicted RBP19.09■□□□□ 0.65
SMPD1-205ENST00000531303 MCCC1Q96RQ3 725 aaPredicted RBP19.09■□□□□ 0.65
SMPD1-205ENST00000531303 WRAP53Q9BUR4 548 aaKnown RBP19.09■□□□□ 0.65
SMPD1-205ENST00000531303 TXLNGYQ9BZA5 131 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 PHACTR1Q9C0D0 580 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 VPS37BQ9H9H4 285 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 BPIFA1Q9NP55 256 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 CD93Q9NPY3 652 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 ARGLU1Q9NWB6 273 aaPredicted RBP19.09■□□□□ 0.65
SMPD1-205ENST00000531303 HACD3Q9P035 362 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 SLC2A6Q9UGQ3 507 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 SOX13Q9UN79 622 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 FNDC3AQ9Y2H6 1198 aaKnown RBP19.09■□□□□ 0.65
SMPD1-205ENST00000531303 RPS6KL1Q9Y6S9 549 aa19.09■□□□□ 0.65
SMPD1-205ENST00000531303 MAGEB16A2A368 324 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 C2orf81A6NN90 581 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 CCL22O00626 93 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 ACSL3O95573 720 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 PGAM1P18669 254 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 LHCGRP22888 699 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 NFKBIAP25963 317 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 SSTR1P30872 391 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 VIPR1P32241 457 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 ARHGEF7Q14155 803 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 TMEM31Q5JXX7 168 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 LRRC66Q68CR7 880 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 UNC5AQ6ZN44 842 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 PBXIP1Q96AQ6 731 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 MFSD3Q96ES6 412 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 FCRL3Q96P31 734 aaPredicted RBP19.08■□□□□ 0.64
SMPD1-205ENST00000531303 RANBP9Q96S59 729 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 KIFC1Q9BW19 673 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 ZFYVE1Q9HBF4 777 aa19.08■□□□□ 0.64
SMPD1-205ENST00000531303 PRR23AA6NEV1 266 aa19.07■□□□□ 0.64
SMPD1-205ENST00000531303 SPINT1O43278 529 aa19.07■□□□□ 0.64
SMPD1-205ENST00000531303 ALDH1A2O94788 518 aa19.07■□□□□ 0.64
SMPD1-205ENST00000531303 LPOP22079 712 aaPredicted RBP19.07■□□□□ 0.64
SMPD1-205ENST00000531303 PXNP49023 591 aaPredicted RBP19.07■□□□□ 0.64
SMPD1-205ENST00000531303 CDKN3Q16667 212 aa19.07■□□□□ 0.64
SMPD1-205ENST00000531303 ANKRD20A4Q4UJ75 823 aa19.07■□□□□ 0.64
SMPD1-205ENST00000531303 TSTD2Q5T7W7 516 aa19.07■□□□□ 0.64
SMPD1-205ENST00000531303 AGBL4Q5VU57 503 aa19.07■□□□□ 0.64
SMPD1-205ENST00000531303 ESRP1Q6NXG1 681 aaKnown RBP19.07■□□□□ 0.64
SMPD1-205ENST00000531303 MICALCLQ6ZW33 695 aa19.07■□□□□ 0.64
SMPD1-205ENST00000531303 DPPA4Q7L190 304 aa19.07■□□□□ 0.64
SMPD1-205ENST00000531303 TTC30BQ8N4P2 665 aa19.07■□□□□ 0.64
SMPD1-205ENST00000531303 EID2BQ96D98 161 aa19.07■□□□□ 0.64
SMPD1-205ENST00000531303 DNAJC1Q96KC8 554 aaKnown RBP19.07■□□□□ 0.64
SMPD1-205ENST00000531303 SRPK1Q96SB4 655 aaKnown RBP19.07■□□□□ 0.64
SMPD1-205ENST00000531303 TRABDQ9H4I3 376 aa19.07■□□□□ 0.64
SMPD1-205ENST00000531303 LRRC4CQ9HCJ2 640 aa19.07■□□□□ 0.64
SMPD1-205ENST00000531303 NCKAP1Q9Y2A7 1128 aa19.07■□□□□ 0.64
SMPD1-205ENST00000531303 FAM237BA0A1B0GVD1 139 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 MROH6A6NGR9 719 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 STX7O15400 261 aaKnown RBP19.06■□□□□ 0.64
SMPD1-205ENST00000531303 POLBP06746 335 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 H2AFXP16104 143 aaPredicted RBP19.06■□□□□ 0.64
SMPD1-205ENST00000531303 MMP12P39900 470 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 GPX6P59796 221 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 ZBTB16Q05516 673 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 CCDC15Q0P6D6 951 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 RALGDSQ12967 914 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 CBLBQ13191 982 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 LAMB3Q13751 1172 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 CNGA3Q16281 694 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 C3orf62Q6ZUJ4 267 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 TRMT10CQ7L0Y3 403 aaKnown RBP19.06■□□□□ 0.64
SMPD1-205ENST00000531303 RELL1Q8IUW5 271 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 OR4K2Q8NGD2 314 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 OR13C4Q8NGS5 318 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 OR14C36Q8NHC7 312 aa19.06■□□□□ 0.64
SMPD1-205ENST00000531303 PTCD2Q8WV60 388 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms