RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 CHRAC1Q9NRG0 131 aa9.91□□□□□ -0.82
CTNND1-228ENST00000531007 TREX1Q9NSU2 369 aa9.91□□□□□ -0.82
CTNND1-228ENST00000531007 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.91□□□□□ -0.821e-6■■■■□ 21.3
CTNND1-228ENST00000531007 NUMBLQ9Y6R0 609 aa9.91□□□□□ -0.82
CTNND1-228ENST00000531007 PRRC2BQ5JSZ5 2229 aaKnown RBP9.91□□□□□ -0.82
CTNND1-228ENST00000531007 DOCK8Q8NF50 2099 aa9.91□□□□□ -0.82
CTNND1-228ENST00000531007 EDDM13A0A1B0GTR0 161 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 TBC1D3BA6NDS4 549 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 K7ERQ8 282 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 PFDN6O15212 129 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 PRLP01236 227 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 C1QAP02745 245 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 PRNPP04156 253 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 SNRPAP09012 282 aaKnown RBP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 HNRNPLP14866 589 aaKnown RBP eCLIP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 TPH1P17752 444 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 GP5P40197 560 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 OPRD1P41143 372 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 CTSOP43234 321 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 CCNHP51946 323 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 CSE1LP55060 971 aaKnown RBP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 TRAF2Q12933 501 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 THOC5Q13769 683 aaKnown RBP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 LEXMQ3ZCV2 418 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 TTMPQ5BVD1 217 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 TMEM215Q68D42 235 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 GDPD4Q6W3E5 623 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 DSG4Q86SJ6 1040 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 KCNMB4Q86W47 210 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 RALGPS2Q86X27 583 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 CTAGE3PQ8IX95 158 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 PHTF2Q8N3S3 785 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 RYBPQ8N488 228 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 SLC25A41Q8N5S1 370 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 OR2A12Q8NGT7 310 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 UHMK1Q8TAS1 419 aaKnown RBP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 FAM76AQ8TAV0 307 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 EPS8L3Q8TE67 593 aaKnown RBP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 FRS2Q8WU20 508 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 ARL8AQ96BM9 186 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 ZFYVE19Q96K21 471 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 EXOC2Q96KP1 924 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 RPL10LQ96L21 214 aaKnown RBP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 PLA2G2FQ9BZM2 168 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 TM6SF2Q9BZW4 377 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 SUV39H2Q9H5I1 410 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 FBRSQ9HAH7 460 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 PLAC1Q9HBJ0 212 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 PPANQ9NQ55 473 aaKnown RBP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 C20orf96Q9NUD7 363 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 BCCIPQ9P287 314 aaKnown RBP eCLIP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 THAP10Q9P2Z0 257 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 DKK3Q9UBP4 350 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 EVLQ9UI08 416 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 SMG5Q9UPR3 1016 aaKnown RBP9.9□□□□□ -0.82
CTNND1-228ENST00000531007 CHKBQ9Y259 395 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 PCDHB9Q9Y5E1 797 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 PCDHGC4Q9Y5F7 938 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 ACTL7AQ9Y615 435 aa9.9□□□□□ -0.82
CTNND1-228ENST00000531007 MIA3Q5JRA6 1907 aa9.9□□□□□ -0.83
CTNND1-228ENST00000531007 KIAA1549LQ6ZVL6 1849 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 A0A0J9YYE9 177 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 TSPAN11A1L157 253 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 H7C0S8 307 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 LDB2O43679 373 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 RPP40O75818 363 aaKnown RBP9.89□□□□□ -0.83
CTNND1-228ENST00000531007 KAT7O95251 611 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 TRBC1P01850 177 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 CYP2A6P11509 494 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-228ENST00000531007 KRT15P19012 456 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 LPOP22079 712 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-228ENST00000531007 KCNA5P22460 613 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 GCAP28676 217 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 SPRP35270 261 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-228ENST00000531007 HMGCLP35914 325 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 CHRNA4P43681 627 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 ARCN1P48444 511 aaKnown RBP9.89□□□□□ -0.83
CTNND1-228ENST00000531007 STK19P49842 368 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-228ENST00000531007 PRAMEP78395 509 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 CRADDP78560 199 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 CCDC15Q0P6D6 951 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 MTM1Q13496 603 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 OLIG2Q13516 323 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 GRM2Q14416 872 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 ELAVL3Q14576 367 aaKnown RBP9.89□□□□□ -0.83
CTNND1-228ENST00000531007 IHHQ14623 411 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 SMAD2Q15796 467 aaKnown RBP9.89□□□□□ -0.83
CTNND1-228ENST00000531007 HNRNPA1L2Q32P51 320 aaKnown RBP9.89□□□□□ -0.83
CTNND1-228ENST00000531007 ATXN7L2Q5T6C5 722 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-228ENST00000531007 TEDDM1Q5T9Z0 273 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 MRNIPQ6NTE8 343 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 TIFABQ6ZNK6 161 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 DPY19L3Q6ZPD9 716 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 CAPN12Q6ZSI9 719 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 USP45Q70EL2 814 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 TRMT11Q7Z4G4 463 aaKnown RBP9.89□□□□□ -0.83
CTNND1-228ENST00000531007 GLT6D1Q7Z4J2 308 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 RASSF3Q86WH2 238 aa9.89□□□□□ -0.83
CTNND1-228ENST00000531007 C12orf40Q86WS4 652 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms