RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 TSPAN11A1L157 253 aa11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 PRSS38A1L453 326 aa11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 PPM1DO15297 605 aa11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 KDELR3O43731 214 aa11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 IGSF6O95976 241 aa11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 MPSTP25325 297 aa11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 SYKP43405 635 aa11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 LRRC63Q05C16 580 aa11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 ATXN7L2Q5T6C5 722 aaPredicted RBP11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 WDR74Q6RFH5 385 aaPredicted RBP11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 ENOSF1Q7L5Y1 443 aa11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 LYSMD3Q7Z3D4 306 aa11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 DRC7Q8IY82 874 aa11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 FAM81BQ96LP2 452 aa11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 SLC29A3Q9BZD2 475 aa11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 PCDH12Q9NPG4 1184 aa11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 KCND3Q9UK17 655 aa11.66□□□□□ -0.54
AMBRA1-207ENST00000529553 TCP11X1B4DZS4 312 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 POLR1CO15160 346 aaPredicted RBP11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 SORBS2O94875 1100 aaKnown RBP11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 PDGFAP04085 211 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 RHOQP17081 205 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 F8A1P23610 371 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 CSF2RBP32927 897 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 PRCPP42785 496 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 SULT1E1P49888 294 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 NRG1Q02297 640 aaPredicted RBP11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 ERV3-1Q14264 604 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 INPP5JQ15735 1006 aaPredicted RBP11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 BRAT1Q6PJG6 821 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 SMYD4Q8IYR2 804 aaPredicted RBP11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 TTC13Q8NBP0 860 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 PRR7Q8TB68 274 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 CEP63Q96MT8 703 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 ZNF641Q96N77 438 aaPredicted RBP11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 CTRCQ99895 268 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 GTPBP4Q9BZE4 634 aaKnown RBP11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 SUV39H2Q9H5I1 410 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 MLXIPLQ9NP71 852 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 TMEM9Q9P0T7 183 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 PCDHGA9Q9Y5G4 932 aaKnown RBP11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 MED13Q9UHV7 2174 aa11.65□□□□□ -0.54
AMBRA1-207ENST00000529553 BUB1O43683 1085 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 RECQL5O94762 991 aaPredicted RBP11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 TMCC1O94876 653 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 ERBB2P04626 1255 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 FURINP09958 794 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 ZSCAN22P10073 491 aaPredicted RBP11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 TFE3P19532 575 aaPredicted RBP11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 DLSTP36957 453 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 SCNN1AP37088 669 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 MMP12P39900 470 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 LEPRP48357 1165 aaKnown RBP11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 SEMA5AQ13591 1074 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 PAPD7Q5XG87 772 aaKnown RBP11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 PNCKQ6P2M8 343 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 C6orf15Q6UXA7 325 aaPredicted RBP11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 KRBA2Q6ZNG9 492 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 BNIPLQ7Z465 357 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 NLRP14Q86W24 1093 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 NAGSQ8N159 534 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 OR10G6Q8NH81 332 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 SEC14L1Q92503 715 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 AHCYL2Q96HN2 611 aaKnown RBP11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 TBCBQ99426 244 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 LGR4Q9BXB1 951 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 WDR26Q9H7D7 661 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 CARS2Q9HA77 564 aaKnown RBP11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 UBE2TQ9NPD8 197 aaPredicted RBP11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 TMEM248Q9NWD8 314 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 RMND1Q9NWS8 449 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 KCTD5Q9NXV2 234 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 MOSPD1Q9UJG1 213 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 ERRFI1Q9UJM3 462 aaPredicted RBP11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 SLC5A6Q9Y289 635 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 PCDHGB7Q9Y5F8 929 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 PCDHGA6Q9Y5G7 932 aa11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 MRPS18BQ9Y676 258 aaKnown RBP11.64□□□□□ -0.55
AMBRA1-207ENST00000529553 ESPL1Q14674 2120 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 HNRNPRO43390 633 aaKnown RBP11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 RAMP2O60895 175 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 F13A1P00488 732 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 CEACAM5P06731 702 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 MYCLP1P12525 358 aaPredicted RBP11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 FASLGP48023 281 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 NDUFA8P51970 172 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 PGDP52209 483 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 PMS1P54277 932 aaKnown RBP11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 RNASE9P60153 205 aaKnown RBP11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 RHOAP61586 193 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 FOXD4L6Q3SYB3 417 aaPredicted RBP11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 ZNF658Q5TYW1 1059 aaPredicted RBP11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 FOXD4L3Q6VB84 417 aaPredicted RBP11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 DNAAF5Q86Y56 855 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 HPS6Q86YV9 775 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 TCTN2Q96GX1 697 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 CCDC34Q96HJ3 373 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 C5orf34Q96MH7 638 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 TWSG1Q9GZX9 223 aa11.63□□□□□ -0.55
AMBRA1-207ENST00000529553 SYNCQ9H7C4 482 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms