RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-209	ENST00000529372	CUEDC2	Q9H467	287 aa		11.76	□□□□□ -0.53
PSMD13-209	ENST00000529372	POPDC2	Q9HBU9	364 aa		11.76	□□□□□ -0.53
PSMD13-209	ENST00000529372	FRMD4B	Q9Y2L6	1034 aa		11.76	□□□□□ -0.53
PSMD13-209	ENST00000529372	SNX10	Q9Y5X0	201 aa		11.76	□□□□□ -0.53
PSMD13-209	ENST00000529372	MN1	Q10571	1320 aa	Predicted RBP	11.76	□□□□□ -0.53
PSMD13-209	ENST00000529372	RTTN	Q86VV8	2226 aa		11.76	□□□□□ -0.53
PSMD13-209	ENST00000529372	ABCA4	P78363	2273 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	PVALEF	A0A1B0GWK0	134 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	PRSS38	A1L453	326 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	RNF225	M0QZC1	329 aa	Predicted RBP	11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	KRIT1	O00522	736 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	KLRC4	O43908	158 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	SNRPB2	P08579	225 aa	Known RBP	11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	HOXC4	P09017	264 aa	Predicted RBP	11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	GTF2H1	P32780	548 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	CLCN1	P35523	988 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	TRIM23	P36406	574 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	STAT1	P42224	750 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	GPD2	P43304	727 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	NDST2	P52849	883 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	YWHAZ	P63104	245 aa	Known RBP	11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	ELOA	Q14241	798 aa	Known RBP	11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	OTUD1	Q5VV17	481 aa	Predicted RBP	11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	FAM173B	Q6P4H8	233 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	TFAP2D	Q7Z6R9	452 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	HPS6	Q86YV9	775 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	RHOT1	Q8IXI2	618 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	OR2AP1	Q8NGE2	309 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	UBE2Q2	Q8WVN8	375 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	OSBPL1A	Q9BXW6	950 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	FAM204A	Q9H8W3	233 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	ACSS2	Q9NR19	701 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	DDIT4	Q9NX09	232 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	MPP6	Q9NZW5	540 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	COPG2	Q9UBF2	871 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	PRRC2A	P48634	2157 aa	Known RBP	11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	CNTRL	Q7Z7A1	2325 aa		11.75	□□□□□ -0.53
PSMD13-209	ENST00000529372	IGLV3-10	A0A075B6K4	115 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	ILVBL	A1L0T0	632 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	NADK	O95544	446 aa	Predicted RBP	11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	GSR	P00390	522 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	PAEP	P09466	180 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	BPI	P17213	487 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	BRD2	P25440	801 aa	Known RBP	11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	CASP14	P31944	242 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	GARS	P41250	739 aa	Known RBP	11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	PTGIR	P43119	386 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	MXI1	P50539	228 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	RPS18	P62269	152 aa	Known RBP	11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	AMPD3	Q01432	767 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	DNM1	Q05193	864 aa	Known RBP	11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	FOXM1	Q08050	763 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	CUL4B	Q13620	913 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	MYLK3	Q32MK0	819 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	GDPD4	Q6W3E5	623 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	DHX58	Q96C10	678 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	SLC2A13	Q96QE2	648 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	SMAD5	Q99717	465 aa	Known RBP	11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	MDFI	Q99750	246 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	SPON2	Q9BUD6	331 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	COX16	Q9P0S2	106 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	TRAF3IP3	Q9Y228	551 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	OSGIN2	Q9Y236	505 aa		11.74	□□□□□ -0.53
PSMD13-209	ENST00000529372	VPS13C	Q709C8	3753 aa		11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	C21orf140	B9A014	251 aa		11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	CACNB4	O00305	520 aa	Predicted RBP	11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	KIAA0754	O94854	1291 aa		11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	POP4	O95707	220 aa	Known RBP	11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	PDIA4	P13667	645 aa	Known RBP	11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	GM2A	P17900	193 aa		11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	FBN1	P35555	2871 aa	Known RBP	11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	FASLG	P48023	281 aa		11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	CEBPZ	Q03701	1054 aa	Known RBP	11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	RAPGEF1	Q13905	1077 aa		11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	SLC30A9	Q6PML9	568 aa		11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	RYBP	Q8N488	228 aa	Predicted RBP	11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	ADAMTS17	Q8TE56	1095 aa		11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	ITLN2	Q8WWU7	325 aa	Predicted RBP	11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	ARHGEF2	Q92974	986 aa	Known RBP	11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	STAMBPL1	Q96FJ0	436 aa		11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	TRIM62	Q9BVG3	475 aa		11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	REPIN1	Q9BWE0	567 aa	Known RBP	11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	GSDMC	Q9BYG8	508 aa		11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	BRD8	Q9H0E9	1235 aa		11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	SIK2	Q9H0K1	926 aa		11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	ATP13A1	Q9HD20	1204 aa		11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.73	□□□□□ -0.53
PSMD13-209	ENST00000529372	FER1L5	A0AVI2	2057 aa		11.72	□□□□□ -0.53
PSMD13-209	ENST00000529372	CXorf51A	A0A1B0GTR3	108 aa		11.72	□□□□□ -0.53
PSMD13-209	ENST00000529372		E5RJQ4	531 aa		11.72	□□□□□ -0.53
PSMD13-209	ENST00000529372	CEACAM5	P06731	702 aa		11.72	□□□□□ -0.53
PSMD13-209	ENST00000529372	ANKRD34C	P0C6C1	535 aa		11.72	□□□□□ -0.53
PSMD13-209	ENST00000529372	DRD2	P14416	443 aa		11.72	□□□□□ -0.53
PSMD13-209	ENST00000529372	CD1E	P15812	388 aa		11.72	□□□□□ -0.53
PSMD13-209	ENST00000529372	KEL	P23276	732 aa		11.72	□□□□□ -0.53
PSMD13-209	ENST00000529372	OR1E1	P30953	314 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms