RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 VSIG1Q86XK7 387 aa23.21■■□□□ 1.31
PKP3-206ENST00000528036 ARL10Q8N8L6 244 aa23.21■■□□□ 1.31
PKP3-206ENST00000528036 OR56A4Q8NGH8 313 aa23.21■■□□□ 1.31
PKP3-206ENST00000528036 SNIP1Q8TAD8 396 aaKnown RBP23.21■■□□□ 1.31
PKP3-206ENST00000528036 PDCD6IPQ8WUM4 868 aaKnown RBP23.21■■□□□ 1.31
PKP3-206ENST00000528036 FGF11Q92914 225 aa23.21■■□□□ 1.31
PKP3-206ENST00000528036 SCRN2Q96FV2 425 aa23.21■■□□□ 1.31
PKP3-206ENST00000528036 TSGA13Q96PP4 275 aa23.21■■□□□ 1.31
PKP3-206ENST00000528036 TCEAL2Q9H3H9 227 aaPredicted RBP23.21■■□□□ 1.31
PKP3-206ENST00000528036 B4GALT6Q9UBX8 382 aa23.21■■□□□ 1.31
PKP3-206ENST00000528036 PADI4Q9UM07 663 aa23.21■■□□□ 1.31
PKP3-206ENST00000528036 PPIL1Q9Y3C6 166 aa23.21■■□□□ 1.31
PKP3-206ENST00000528036 OR1A2Q9Y585 309 aa23.21■■□□□ 1.31
PKP3-206ENST00000528036 PCDHGC4Q9Y5F7 938 aa23.21■■□□□ 1.31
PKP3-206ENST00000528036 CFAP47Q6ZTR5 3102 aa23.2■■□□□ 1.3
PKP3-206ENST00000528036 ZNF487B1APH4 448 aa23.2■■□□□ 1.3
PKP3-206ENST00000528036 MATN3O15232 486 aa23.2■■□□□ 1.3
PKP3-206ENST00000528036 TEAD1P28347 426 aa23.2■■□□□ 1.3
PKP3-206ENST00000528036 CLDN6P56747 220 aa23.2■■□□□ 1.3
PKP3-206ENST00000528036 SEMG2Q02383 582 aa23.2■■□□□ 1.3
PKP3-206ENST00000528036 ARHGEF7Q14155 803 aa23.2■■□□□ 1.3
PKP3-206ENST00000528036 ASTE1Q2TB18 679 aaPredicted RBP23.2■■□□□ 1.3
PKP3-206ENST00000528036 ANKRD20A8PQ5CZ79 823 aa23.2■■□□□ 1.3
PKP3-206ENST00000528036 PNCKQ6P2M8 343 aa23.2■■□□□ 1.3
PKP3-206ENST00000528036 RHOT2Q8IXI1 618 aa23.2■■□□□ 1.3
PKP3-206ENST00000528036 RAVER1Q8IY67 606 aaKnown RBP23.2■■□□□ 1.3
PKP3-206ENST00000528036 CCDC42Q96M95 316 aa23.2■■□□□ 1.3
PKP3-206ENST00000528036 COQ10AQ96MF6 247 aa23.2■■□□□ 1.3
PKP3-206ENST00000528036 RBM15Q96T37 977 aaKnown RBP eCLIP23.2■■□□□ 1.35e-6■■□□□ 11.5
PKP3-206ENST00000528036 CLPBQ9H078 707 aa23.2■■□□□ 1.3
PKP3-206ENST00000528036 WDR26Q9H7D7 661 aa23.2■■□□□ 1.3
PKP3-206ENST00000528036 TDRD6O60522 2096 aaKnown RBP23.2■■□□□ 1.3
PKP3-206ENST00000528036 CSO75390 466 aaKnown RBP23.19■■□□□ 1.3
PKP3-206ENST00000528036 HEXIM1O94992 359 aaKnown RBP23.19■■□□□ 1.3
PKP3-206ENST00000528036 PGLSO95336 258 aa23.19■■□□□ 1.3
PKP3-206ENST00000528036 PRKCGP05129 697 aa23.19■■□□□ 1.3
PKP3-206ENST00000528036 LSSP48449 732 aa23.19■■□□□ 1.3
PKP3-206ENST00000528036 PEX6Q13608 980 aa23.19■■□□□ 1.3
PKP3-206ENST00000528036 GUSBP11Q6P575 273 aa23.19■■□□□ 1.3
PKP3-206ENST00000528036 RBM44Q6ZP01 1051 aaKnown RBP23.19■■□□□ 1.3
PKP3-206ENST00000528036 VSTM4Q8IW00 320 aa23.19■■□□□ 1.3
PKP3-206ENST00000528036 SLC35F3Q8IY50 421 aa23.19■■□□□ 1.3
PKP3-206ENST00000528036 PGBD5Q8N414 524 aa23.19■■□□□ 1.3
PKP3-206ENST00000528036 MAML1Q92585 1016 aa23.19■■□□□ 1.3
PKP3-206ENST00000528036 TSACCQ96A04 125 aaPredicted RBP23.19■■□□□ 1.3
PKP3-206ENST00000528036 FAF2Q96CS3 445 aa23.19■■□□□ 1.3
PKP3-206ENST00000528036 NUS1Q96E22 293 aa23.19■■□□□ 1.3
PKP3-206ENST00000528036 ZNF578Q96N58 590 aaPredicted RBP23.19■■□□□ 1.3
PKP3-206ENST00000528036 ZNF830Q96NB3 372 aaPredicted RBP23.19■■□□□ 1.3
PKP3-206ENST00000528036 MCCC1Q96RQ3 725 aaPredicted RBP23.19■■□□□ 1.3
PKP3-206ENST00000528036 PHPT1Q9NRX4 125 aaPredicted RBP23.19■■□□□ 1.3
PKP3-206ENST00000528036 TMX2-CTNND1H3BSU7 103 aa23.18■■□□□ 1.3
PKP3-206ENST00000528036 DXOO77932 396 aaKnown RBP23.18■■□□□ 1.3
PKP3-206ENST00000528036 PYGLP06737 847 aa23.18■■□□□ 1.3
PKP3-206ENST00000528036 ABCG1P45844 678 aa23.18■■□□□ 1.3
PKP3-206ENST00000528036 MMRN1Q13201 1228 aa23.18■■□□□ 1.3
PKP3-206ENST00000528036 ZFYVE27Q5T4F4 411 aa23.18■■□□□ 1.3
PKP3-206ENST00000528036 NCBP2-AS2Q69YL0 99 aa23.18■■□□□ 1.3
PKP3-206ENST00000528036 ALG1LQ6GMV1 187 aa23.18■■□□□ 1.3
PKP3-206ENST00000528036 RD3Q7Z3Z2 195 aa23.18■■□□□ 1.3
PKP3-206ENST00000528036 CNGA4Q8IV77 575 aa23.18■■□□□ 1.3
PKP3-206ENST00000528036 PCDH19Q8TAB3 1148 aa23.18■■□□□ 1.3
PKP3-206ENST00000528036 HNRNPLLQ8WVV9 542 aaKnown RBP23.18■■□□□ 1.3
PKP3-206ENST00000528036 FUBP1Q96AE4 644 aaKnown RBP23.18■■□□□ 1.3
PKP3-206ENST00000528036 POLR1BQ9H9Y6 1135 aa23.18■■□□□ 1.3
PKP3-206ENST00000528036 NT5MQ9NPB1 228 aa23.18■■□□□ 1.3
PKP3-206ENST00000528036 ABHD10Q9NUJ1 306 aa23.18■■□□□ 1.3
PKP3-206ENST00000528036 PNMA8BQ9ULN7 279 aaPredicted RBP23.18■■□□□ 1.3
PKP3-206ENST00000528036 GPR34Q9UPC5 381 aa23.18■■□□□ 1.3
PKP3-206ENST00000528036 BRINP1O60477 761 aa23.17■■□□□ 1.3
PKP3-206ENST00000528036 ZNF30P17039 623 aa23.17■■□□□ 1.3
PKP3-206ENST00000528036 EIF2S3P41091 472 aaKnown RBP23.17■■□□□ 1.3
PKP3-206ENST00000528036 MLLT3P42568 568 aaPredicted RBP23.17■■□□□ 1.3
PKP3-206ENST00000528036 ERVPABLB-1P60509 514 aa23.17■■□□□ 1.3
PKP3-206ENST00000528036 RPL26P61254 145 aaKnown RBP23.17■■□□□ 1.3
PKP3-206ENST00000528036 ITKQ08881 620 aa23.17■■□□□ 1.3
PKP3-206ENST00000528036 CNGA3Q16281 694 aa23.17■■□□□ 1.3
PKP3-206ENST00000528036 ISXQ2M1V0 245 aa23.17■■□□□ 1.3
PKP3-206ENST00000528036 COL28A1Q2UY09 1125 aa23.17■■□□□ 1.3
PKP3-206ENST00000528036 TBC1D25Q3MII6 688 aa23.17■■□□□ 1.3
PKP3-206ENST00000528036 IGF2-ASQ6U949 168 aa23.17■■□□□ 1.3
PKP3-206ENST00000528036 CBARPQ8N350 705 aaPredicted RBP23.17■■□□□ 1.3
PKP3-206ENST00000528036 SEMA3CQ99985 751 aa23.17■■□□□ 1.3
PKP3-206ENST00000528036 INTUQ9ULD6 942 aa23.17■■□□□ 1.3
PKP3-206ENST00000528036 RPL26L1Q9UNX3 145 aaKnown RBP23.17■■□□□ 1.3
PKP3-206ENST00000528036 RAI2Q9Y5P3 530 aa23.17■■□□□ 1.3
PKP3-206ENST00000528036 MFSD11O43934 449 aa23.16■■□□□ 1.3
PKP3-206ENST00000528036 USP12O75317 370 aa23.16■■□□□ 1.3
PKP3-206ENST00000528036 CD48P09326 243 aa23.16■■□□□ 1.3
PKP3-206ENST00000528036 MYCLP1P12525 358 aaPredicted RBP23.16■■□□□ 1.3
PKP3-206ENST00000528036 MYF5P13349 255 aa23.16■■□□□ 1.3
PKP3-206ENST00000528036 MAXP61244 160 aa23.16■■□□□ 1.3
PKP3-206ENST00000528036 TRAF2Q12933 501 aa23.16■■□□□ 1.3
PKP3-206ENST00000528036 C19orf48Q6RUI8 117 aa23.16■■□□□ 1.3
PKP3-206ENST00000528036 NLRP8Q86W28 1048 aa23.16■■□□□ 1.3
PKP3-206ENST00000528036 PLA2G15Q8NCC3 412 aa23.16■■□□□ 1.3
PKP3-206ENST00000528036 DTD2Q96FN9 168 aa23.16■■□□□ 1.3
PKP3-206ENST00000528036 NSMCE3Q96MG7 304 aa23.16■■□□□ 1.3
PKP3-206ENST00000528036 RBM22Q9NW64 420 aaKnown RBP eCLIP23.16■■□□□ 1.3
PKP3-206ENST00000528036 GULP1Q9UBP9 304 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms