RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 RHOT1Q8IXI2 618 aa15.58■□□□□ 0.08
CAPN1-213ENST00000527897 CCDC13Q8IYE1 715 aa15.58■□□□□ 0.08
CAPN1-213ENST00000527897 NUS1Q96E22 293 aa15.58■□□□□ 0.08
CAPN1-213ENST00000527897 LGMNQ99538 433 aa15.58■□□□□ 0.08
CAPN1-213ENST00000527897 LRRC61Q9BV99 259 aa15.58■□□□□ 0.08
CAPN1-213ENST00000527897 GOLPH3Q9H4A6 298 aa15.58■□□□□ 0.08
CAPN1-213ENST00000527897 SUDS3Q9H7L9 328 aaPredicted RBP15.58■□□□□ 0.08
CAPN1-213ENST00000527897 EVA1BQ9NVM1 165 aa15.58■□□□□ 0.08
CAPN1-213ENST00000527897 DTLQ9NZJ0 730 aa15.58■□□□□ 0.08
CAPN1-213ENST00000527897 SEPT10Q9P0V9 454 aa15.58■□□□□ 0.08
CAPN1-213ENST00000527897 KLQ9UEF7 1012 aa15.58■□□□□ 0.08
CAPN1-213ENST00000527897 MOSPD1Q9UJG1 213 aa15.58■□□□□ 0.08
CAPN1-213ENST00000527897 CSNK1G3Q9Y6M4 447 aa15.58■□□□□ 0.08
CAPN1-213ENST00000527897 ZZEF1O43149 2961 aa15.58■□□□□ 0.08
CAPN1-213ENST00000527897 MYLKQ15746 1914 aa15.58■□□□□ 0.08
CAPN1-213ENST00000527897 A0A0U1RQS6 177 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 CPED1A4D0V7 1026 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 CFAP69A5D8W1 941 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 TRABD2BA6NFA1 517 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 NPIPB15A6NHN6 443 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-213ENST00000527897 CACNB4O00305 520 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-213ENST00000527897 RASGRP1O95267 797 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 JCHAINP01591 159 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 HLA-DQB2P05538 268 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 ANXA6P08133 673 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 CELA2BP08218 269 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-213ENST00000527897 PDHA1P08559 390 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 CKMT1AP12532 417 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 TSHRP16473 764 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 CYLC1P35663 651 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-213ENST00000527897 SLC1A1P43005 524 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 PEX5P50542 639 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 DUSP3P51452 185 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-213ENST00000527897 SRP54P61011 504 aaKnown RBP15.57■□□□□ 0.08
CAPN1-213ENST00000527897 AP1B1Q10567 949 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 TARDBPQ13148 414 aaKnown RBP eCLIP15.57■□□□□ 0.08
CAPN1-213ENST00000527897 ILKQ13418 452 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 ALG11Q2TAA5 492 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 KAZNQ674X7 775 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 ZCCHC8Q6NZY4 707 aaKnown RBP15.57■□□□□ 0.08
CAPN1-213ENST00000527897 NPNTQ6UXI9 565 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 B4GALNT4Q76KP1 1039 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 NDUFAF2Q8N183 169 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 ATL2Q8NHH9 583 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 MAML1Q92585 1016 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 HDAC11Q96DB2 347 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 WDR92Q96MX6 357 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 TSGA13Q96PP4 275 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 DDX56Q9NY93 547 aaKnown RBP15.57■□□□□ 0.08
CAPN1-213ENST00000527897 CHKBQ9Y259 395 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 PCDHA13Q9Y5I0 950 aa15.57■□□□□ 0.08
CAPN1-213ENST00000527897 C3orf70A6NLC5 250 aaPredicted RBP15.56■□□□□ 0.08
CAPN1-213ENST00000527897 HEXIM1O94992 359 aaKnown RBP15.56■□□□□ 0.08
CAPN1-213ENST00000527897 KRT10P13645 584 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 GM2AP17900 193 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 LHCGRP22888 699 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 ETV3P41162 512 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 BLKP51451 505 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 HK3P52790 923 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 INSM1Q01101 510 aaPredicted RBP15.56■□□□□ 0.08
CAPN1-213ENST00000527897 CYP4F3Q08477 520 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 AGERQ15109 404 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 HSD11B1LQ7Z5J1 315 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 TSPAN33Q86UF1 283 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 CCDC170Q8IYT3 715 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 PELI3Q8N2H9 469 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 PLD5Q8N7P1 536 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 TPCN2Q8NHX9 752 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 IFI44Q8TCB0 444 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 FUBP1Q96AE4 644 aaKnown RBP15.56■□□□□ 0.08
CAPN1-213ENST00000527897 COQ10AQ96MF6 247 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 SMIM14Q96QK8 99 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 CEP41Q9BYV8 373 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 CLPBQ9H078 707 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 ABCG4Q9H172 646 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 WDR26Q9H7D7 661 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 LUC7LQ9NQ29 371 aaKnown RBP15.56■□□□□ 0.08
CAPN1-213ENST00000527897 SIRPGQ9P1W8 387 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 GULP1Q9UBP9 304 aa15.56■□□□□ 0.08
CAPN1-213ENST00000527897 KNTC1P50748 2209 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 LY6G6EA0A0G2JKS1 128 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 TMEM202A6NGA9 273 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 SOWAHDA6NJG2 315 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 SRRM3A6NNA2 597 aaPredicted RBP15.55■□□□□ 0.08
CAPN1-213ENST00000527897 TNFP01375 233 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 ZFXP17010 805 aaPredicted RBP15.55■□□□□ 0.08
CAPN1-213ENST00000527897 CA4P22748 312 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 CD86P42081 329 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 E2F1Q01094 437 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 NIPAL4Q0D2K0 466 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 ELOCQ15369 112 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 NR0B2Q15466 257 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 LRRC38Q5VT99 294 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 KCTD16Q68DU8 428 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 SLC9A4Q6AI14 798 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 PNCKQ6P2M8 343 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 GUSBP11Q6P575 273 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 CRTC1Q6UUV9 634 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 MFSD7Q6UXD7 560 aa15.55■□□□□ 0.08
CAPN1-213ENST00000527897 EFL1Q7Z2Z2 1120 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms