RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 DHX38Q92620 1227 aaKnown RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 HTRA1Q92743 480 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 UFD1Q92890 307 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 SNAPC3Q92966 411 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 MYDGFQ969H8 173 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 RNF170Q96K19 258 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 TEKT5Q96M29 485 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 MTG1Q9BT17 334 aaPredicted RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 MLPHQ9BV36 600 aaPredicted RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 NUSAP1Q9BXS6 441 aaKnown RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 ANO3Q9BYT9 981 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.84□□□□□ -1.47
CD44-225ENST00000527326 EPS8L2Q9H6S3 715 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 CYP4F11Q9HBI6 524 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 OSGEPQ9NPF4 335 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 IFT46Q9NQC8 304 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 IARS2Q9NSE4 1012 aaKnown RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 POLR3BQ9NW08 1133 aaPredicted RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 PAK1IP1Q9NWT1 392 aaPredicted RBP5.84□□□□□ -1.47
CD44-225ENST00000527326 GINS2Q9Y248 185 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 PLLPQ9Y342 182 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 PCDHAC2Q9Y5I4 1007 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 NRXN3Q9Y4C0 1643 aa5.84□□□□□ -1.47
CD44-225ENST00000527326 CNTNAP1P78357 1384 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 MROH5Q6ZUA9 1318 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 RREB1Q92766 1687 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 A0A0B4J269 797 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 B4E1Z4 1266 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 F8W036 122 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 UBE2Q2LH0YL09 131 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 DLL1O00548 723 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 CALUO43852 315 aaPredicted RBP5.83□□□□□ -1.48
CD44-225ENST00000527326 GMDSO60547 372 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 ZNF623O75123 536 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 UGT2B11O75310 529 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 SNNO75324 88 aaPredicted RBP5.83□□□□□ -1.48
CD44-225ENST00000527326 BCAS1O75363 584 aaPredicted RBP5.83□□□□□ -1.48
CD44-225ENST00000527326 PSIP1O75475 530 aaKnown RBP5.83□□□□□ -1.48
CD44-225ENST00000527326 KRT1P04264 644 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 SERPINB2P05120 415 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 COX4I1P13073 169 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 GYS1P13807 737 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 ITGB6P18564 788 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 MATN1P21941 496 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 MMP8P22894 467 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 KELP23276 732 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 HLA-FP30511 346 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 UQCRC1P31930 480 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 IL6STP40189 918 aaPredicted RBP5.83□□□□□ -1.48
CD44-225ENST00000527326 IL12RB1P42701 662 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 MTHFRP42898 656 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 KCNJ1P48048 391 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 STARP49675 285 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 TPMTP51580 245 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 EIF4A1P60842 406 aaKnown RBP5.83□□□□□ -1.48
CD44-225ENST00000527326 RAB14P61106 215 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 CYP4F8P98187 520 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 UBE3AQ05086 875 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 CLCQ05315 142 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 LGALS3BPQ08380 585 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 MGAT3Q09327 533 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 TUBB3Q13509 450 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 RFTN1Q14699 578 aaPredicted RBP5.83□□□□□ -1.48
CD44-225ENST00000527326 PON2Q15165 354 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 MAPK11Q15759 364 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 NEDD8Q15843 81 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 ZYXQ15942 572 aaKnown RBP5.83□□□□□ -1.48
CD44-225ENST00000527326 KIZQ2M2Z5 673 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 HSF5Q4G112 596 aaPredicted RBP5.83□□□□□ -1.48
CD44-225ENST00000527326 TEX44Q53QW1 395 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 BRDTQ58F21 947 aaPredicted RBP5.83□□□□□ -1.48
CD44-225ENST00000527326 RUNDC3AQ59EK9 446 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 PIGGQ5H8A4 983 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 LDLRAP1Q5SW96 308 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 ARMC4Q5T2S8 1044 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 ZBTB37Q5TC79 503 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 SLC9A4Q6AI14 798 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 CIAPIN1Q6FI81 312 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 ALG1LQ6GMV1 187 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 RETSATQ6NUM9 610 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 TMEM65Q6PI78 240 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 CRTC3Q6UUV7 619 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 MAMDC4Q6UXC1 1216 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 TRIM72Q6ZMU5 477 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 BEND4Q6ZU67 534 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 DENND5BQ6ZUT9 1274 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 STXBP4Q6ZWJ1 553 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 RHOUQ7L0Q8 258 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 SV2BQ7L1I2 683 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 LINC00523Q86TU6 105 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 ZDHHC14Q8IZN3 488 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 EID3Q8N140 333 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 SFRP1Q8N474 314 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 BHLHE22Q8NFJ8 381 aaPredicted RBP5.83□□□□□ -1.48
CD44-225ENST00000527326 WDR48Q8TAF3 677 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 SHKBP1Q8TBC3 707 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 GRIN3AQ8TCU5 1115 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 URGCPQ8TCY9 931 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 GPR152Q8TDT2 470 aa5.83□□□□□ -1.48
CD44-225ENST00000527326 ZFP90Q8TF47 636 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms