RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 RAPGEFL1Q9UHV5 662 aa20.81■□□□□ 0.92
CD44-222ENST00000526025 EIF2B4Q9UI10 523 aaKnown RBP20.81■□□□□ 0.92
CD44-222ENST00000526025 USP34Q70CQ2 3546 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 TP53BP1Q12888 1972 aaPredicted RBP20.8■□□□□ 0.92
CD44-222ENST00000526025 IGLON5A6NGN9 336 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 F5H423 210 aaPredicted RBP20.8■□□□□ 0.92
CD44-222ENST00000526025 PRAMEF26H0Y7S4 382 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 MMP20O60882 483 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 SUN1O94901 812 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 ECEL1O95672 775 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 ALPIP09923 528 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 ETS1P14921 441 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 GNSP15586 552 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 CTPS1P17812 591 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 HNRNPA2B1P22626 353 aaKnown RBP20.8■□□□□ 0.92
CD44-222ENST00000526025 LHCGRP22888 699 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 RACK1P63244 317 aaKnown RBP20.8■□□□□ 0.92
CD44-222ENST00000526025 CKAP4Q07065 602 aaKnown RBP20.8■□□□□ 0.92
CD44-222ENST00000526025 SGCGQ13326 291 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 ARHGEF7Q14155 803 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 CNGA3Q16281 694 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 LPAL2Q16609 132 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 WHAMMP3Q1A5X7 153 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 SIRPB2Q5JXA9 342 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 RGL4Q8IZJ4 473 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 TMEM145Q8NBT3 493 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 CCHCR1Q8TD31 782 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 SNX19Q92543 992 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 WRAP53Q9BUR4 548 aaKnown RBP20.8■□□□□ 0.92
CD44-222ENST00000526025 FICDQ9BVA6 458 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 EBF2Q9HAK2 575 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 ETNK1Q9HBU6 452 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 RAB6BQ9NRW1 208 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 HACD3Q9P035 362 aa20.8■□□□□ 0.92
CD44-222ENST00000526025 A0A1B0GTW7 788 aa20.79■□□□□ 0.92
CD44-222ENST00000526025 BCAT2O15382 392 aaPredicted RBP20.79■□□□□ 0.92
CD44-222ENST00000526025 KRT14P02533 472 aa20.79■□□□□ 0.92
CD44-222ENST00000526025 ZSCAN5DPP0CG00 497 aa20.79■□□□□ 0.92
CD44-222ENST00000526025 MAT2AP31153 395 aaKnown RBP20.79■□□□□ 0.92
CD44-222ENST00000526025 AKT2P31751 481 aa20.79■□□□□ 0.92
CD44-222ENST00000526025 FGL2Q14314 439 aa20.79■□□□□ 0.92
CD44-222ENST00000526025 CDKN3Q16667 212 aa20.79■□□□□ 0.92
CD44-222ENST00000526025 PLA2G2CQ5R387 149 aa20.79■□□□□ 0.92
CD44-222ENST00000526025 CRTC1Q6UUV9 634 aa20.79■□□□□ 0.92
CD44-222ENST00000526025 KDELC2Q7Z4H8 507 aa20.79■□□□□ 0.92
CD44-222ENST00000526025 LINC00523Q86TU6 105 aa20.79■□□□□ 0.92
CD44-222ENST00000526025 PDCD7Q8N8D1 485 aaKnown RBP20.79■□□□□ 0.92
CD44-222ENST00000526025 SPATA4Q8NEY3 305 aa20.79■□□□□ 0.92
CD44-222ENST00000526025 PIGKQ92643 395 aa20.79■□□□□ 0.92
CD44-222ENST00000526025 COQ10AQ96MF6 247 aa20.79■□□□□ 0.92
CD44-222ENST00000526025 TBL1YQ9BQ87 522 aa20.79■□□□□ 0.92
CD44-222ENST00000526025 HS3ST3A1Q9Y663 406 aa20.79■□□□□ 0.92
CD44-222ENST00000526025 RIF1Q5UIP0 2472 aaKnown RBP20.79■□□□□ 0.92
CD44-222ENST00000526025 URI1O94763 535 aaPredicted RBP20.78■□□□□ 0.92
CD44-222ENST00000526025 AGTP01019 485 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 MPLP40238 635 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 MAGEA6P43360 314 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 STC1P52823 247 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 CDK16Q00536 496 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 OVGP1Q12889 678 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 DHX34Q14147 1143 aaKnown RBP20.78■□□□□ 0.92
CD44-222ENST00000526025 DUOXA1Q1HG43 343 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 FAXCQ5TGI0 409 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 LRRC66Q68CR7 880 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 PRUNE1Q86TP1 453 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 TSPAN33Q86UF1 283 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 IQCHQ86VS3 1027 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 ZNF592Q92610 1267 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 RUBCNQ92622 972 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 SERAC1Q96JX3 654 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 KLF6Q99612 283 aaPredicted RBP20.78■□□□□ 0.92
CD44-222ENST00000526025 FAM186AA6NE01 2351 aa20.78■□□□□ 0.92
CD44-222ENST00000526025 RGSL1A5PLK6 1076 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 E7EVH7 732 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 TOR1BO14657 336 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 LZTS3O60299 673 aaPredicted RBP20.77■□□□□ 0.92
CD44-222ENST00000526025 GM2AP17900 193 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 TPSB2P20231 275 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 PTGIRP43119 386 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 CHRNA4P43681 627 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 AFF3P51826 1226 aaKnown RBP20.77■□□□□ 0.92
CD44-222ENST00000526025 PTK6Q13882 451 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 TPSAB1Q15661 275 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 DENND5AQ6IQ26 1287 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 ZNF765Q7L2R6 523 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 NLRP8Q86W28 1048 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 NRSN1Q8IZ57 195 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 CENPTQ96BT3 561 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 C19orf43Q9BQ61 176 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 MIR1-1HGQ9H1L0 117 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 ARRDC1-AS1Q9H2J1 176 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 TM9SF3Q9HD45 589 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 TMEM74BQ9NUR3 256 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 NCDNQ9UBB6 729 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 ZNF711Q9Y462 761 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 MRFAP1Q9Y605 127 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 EP300Q09472 2414 aaPredicted RBP20.77■□□□□ 0.92
CD44-222ENST00000526025 PCDH15Q96QU1 1955 aa20.77■□□□□ 0.92
CD44-222ENST00000526025 ZNF106Q9H2Y7 1883 aaKnown RBP20.77■□□□□ 0.92
CD44-222ENST00000526025 C1orf232A0A0U1RR37 186 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms