RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 PPARDQ03181 441 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 IKQ13123 557 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-211ENST00000525970 GRAPQ13588 217 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 ADIPOQQ15848 244 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 KRT24Q2M2I5 525 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 MTX3Q5HYI7 312 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 SEPT14Q6ZU15 432 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 CCDC186Q7Z3E2 898 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 GLRX5Q86SX6 157 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 TBC1D26Q86UD7 250 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 TSPAN33Q86UF1 283 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 SNX32Q86XE0 403 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 TDRPQ86YL5 185 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 CEP97Q8IW35 865 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 UEVLDQ8IX04 471 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 KIAA2013Q8IYS2 634 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 ZNF713Q8N859 430 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-211ENST00000525970 HJURPQ8NCD3 748 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-211ENST00000525970 GOT1L1Q8NHS2 421 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-211ENST00000525970 VPS33AQ96AX1 596 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 ZNF653Q96CK0 615 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 JAKMIP1Q96N16 626 aaKnown RBP4.68□□□□□ -1.66
CSDE1-211ENST00000525970 DGAT2Q96PD7 388 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 NCAPGQ9BPX3 1015 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 PLK3Q9H4B4 646 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 ST6GALNAC4Q9H4F1 302 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 SELENONQ9NZV5 590 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 EXO1Q9UQ84 846 aaKnown RBP4.68□□□□□ -1.66
CSDE1-211ENST00000525970 FAM96BQ9Y3D0 163 aa4.68□□□□□ -1.66
CSDE1-211ENST00000525970 ARHGEF40Q8TER5 1519 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 TRBV5-7A0A0A0MS05 114 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 A0A0U1RQF3 1178 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 A0A1B0GVM2 712 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 SMIM35A0A1B0GVV1 85 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 TCRBV21S2A2A0A5A6 115 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 HSPB2A8KAH6 182 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 KLRF2D3W0D1 207 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 MSI1O43347 362 aaKnown RBP4.67□□□□□ -1.66
CSDE1-211ENST00000525970 KLK8O60259 260 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 LCKP06239 509 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 KRT10P13645 584 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 TMEM11P17152 192 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 HOXB6P17509 224 aaKnown RBP4.67□□□□□ -1.66
CSDE1-211ENST00000525970 CTPS1P17812 591 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 SRD5A1P18405 259 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 ACADLP28330 430 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 ARHGAP25P42331 645 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 MSH2P43246 934 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 CXCR3P49682 368 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 LIG4P49917 911 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 GALCP54803 685 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 RBP5P82980 135 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 BFSP1Q12934 665 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 MTA1Q13330 715 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 SNTB1Q13884 538 aaKnown RBP4.67□□□□□ -1.66
CSDE1-211ENST00000525970 DRAP1Q14919 205 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-211ENST00000525970 PGM5Q15124 567 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 HSPB2Q16082 182 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 SUPT20HL1Q3ZLR7 823 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 CDONQ4KMG0 1287 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 SGO1Q5FBB7 561 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 PLBD1Q6P4A8 553 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 ZNF813Q6ZN06 617 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 QSOX2Q6ZRP7 698 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 MFSD6Q6ZSS7 791 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 DNAJB7Q7Z6W7 309 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-211ENST00000525970 THNSL1Q8IYQ7 743 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 RNF168Q8IYW5 571 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-211ENST00000525970 OR8H3Q8N146 312 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 GALNT16Q8N428 558 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 MCPH1Q8NEM0 835 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 OSR1Q8TAX0 266 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-211ENST00000525970 ZNF622Q969S3 477 aaKnown RBP eCLIP4.67□□□□□ -1.66
CSDE1-211ENST00000525970 RMDN1Q96DB5 314 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 CEP295NLQ96MC4 621 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 TMEM68Q96MH6 324 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 FCRL4Q96PJ5 515 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 BBS4Q96RK4 519 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 PAFAH2Q99487 392 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 DESI2Q9BSY9 194 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 KIFC3Q9BVG8 833 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 RETREG1Q9H6L5 497 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 ACTR5Q9H9F9 607 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-211ENST00000525970 WDR6Q9NNW5 1121 aaKnown RBP4.67□□□□□ -1.66
CSDE1-211ENST00000525970 KLHL13Q9P2N7 655 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 MAFFQ9ULX9 164 aa4.67□□□□□ -1.66
CSDE1-211ENST00000525970 AAR2Q9Y312 384 aaKnown RBP4.67□□□□□ -1.66
CSDE1-211ENST00000525970 LSM4Q9Y4Z0 139 aaKnown RBP4.67□□□□□ -1.66
CSDE1-211ENST00000525970 LOC100509620A0A075B734 347 aa4.66□□□□□ -1.66
CSDE1-211ENST00000525970 URADA6NGE7 173 aa4.66□□□□□ -1.66
CSDE1-211ENST00000525970 KCNU1A8MYU2 1149 aa4.66□□□□□ -1.66
CSDE1-211ENST00000525970 RNMTO43148 476 aaKnown RBP4.66□□□□□ -1.66
CSDE1-211ENST00000525970 GGPS1O95749 300 aa4.66□□□□□ -1.66
CSDE1-211ENST00000525970 BMP15O95972 392 aa4.66□□□□□ -1.66
CSDE1-211ENST00000525970 PLAUP00749 431 aa4.66□□□□□ -1.66
CSDE1-211ENST00000525970 MYBL1P10243 752 aa4.66□□□□□ -1.66
CSDE1-211ENST00000525970 IL7RP16871 459 aa4.66□□□□□ -1.66
CSDE1-211ENST00000525970 ZNF182P17025 639 aaPredicted RBP4.66□□□□□ -1.66
CSDE1-211ENST00000525970 AGAP20933 346 aa4.66□□□□□ -1.66
CSDE1-211ENST00000525970 CPT2P23786 658 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms