RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 SPC24Q8NBT2 197 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 ACRBPQ8NEB7 543 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 TPCN2Q8NHX9 752 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 ARRDC2Q8TBH0 407 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 PIH1D2Q8WWB5 315 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 APOLD1Q96LR9 279 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 COQ10AQ96MF6 247 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 NLGN3Q9NZ94 848 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 SEPT10Q9P0V9 454 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 SAE1Q9UBE0 346 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 SPASTQ9UBP0 616 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 REXO2Q9Y3B8 237 aaKnown RBP12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 DUSP10Q9Y6W6 482 aa12.88□□□□□ -0.35
TRAPPC4-205ENST00000525079 CHD8Q9HCK8 2581 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 ZNF487B1APH4 448 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 TOR1BO14657 336 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 PSTPIP1O43586 416 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 FZD6O60353 706 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 CELA2BP08218 269 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 CYP2A6P11509 494 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 ZFXP17010 805 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 FECHP22830 423 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 HNF1BP35680 557 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 CDKN2BP42772 138 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 PEX5P50542 639 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 EPHB1P54762 984 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 NAP1L1P55209 391 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 ADCY2Q08462 1091 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 MTM1Q13496 603 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 NFATC4Q14934 902 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 SMAD1Q15797 465 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 ALG11Q2TAA5 492 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 KCTD16Q68DU8 428 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 SPOCD1Q6ZMY3 1216 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 RFLNAQ6ZTI6 216 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 DAAM2Q86T65 1068 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 GALNT15Q8N3T1 639 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 CNTD1Q8N815 330 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 BTN2A2Q8WVV5 523 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 FATE1Q969F0 183 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 FUBP1Q96AE4 644 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 SCRN2Q96FV2 425 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 IL12RB2Q99665 862 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 LRRC61Q9BV99 259 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 SLC13A1Q9BZW2 595 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 CLPBQ9H078 707 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 LUC7LQ9NQ29 371 aaKnown RBP12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 PCDHGA1Q9Y5H4 931 aa12.87□□□□□ -0.35
TRAPPC4-205ENST00000525079 ARID1BQ8NFD5 2236 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 A0A0A6YYK5 440 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 LY6G6EA0A0G2JKS1 128 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 GOLGA6CA6NDK9 693 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 GOLGA6BA6NDN3 693 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 TMEM202A6NGA9 273 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 CST8O60676 142 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 C1SP09871 688 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 GOLGA6DP0CG33 693 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 CTSEP14091 401 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 JUPP14923 745 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 TSHRP16473 764 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 CES1P23141 567 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 ACP1P24666 158 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 HTR1BP28222 390 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 ETV3P41162 512 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 CD86P42081 329 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 SRP54P61011 504 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 IFI35P80217 286 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 SKOR1P84550 965 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 ARHGEF7Q14155 803 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 PDK1Q15118 436 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 ALG1LQ6GMV1 187 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 PNCKQ6P2M8 343 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 CRTC1Q6UUV9 634 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 Q6ZVL8 140 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 USP45Q70EL2 814 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 KDELC2Q7Z4H8 507 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 VSIG1Q86XK7 387 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 CCDC50Q8IVM0 306 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 LPCAT1Q8NF37 534 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 ZCCHC14Q8WYQ9 949 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 KRT35Q92764 455 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 HAUS1Q96CS2 278 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 NUS1Q96E22 293 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 WDR92Q96MX6 357 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 AGAP3Q96P47 875 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 BAG1Q99933 345 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 DUSP23Q9BVJ7 150 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 LGR4Q9BXB1 951 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 TDRD1Q9BXT4 1180 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 MRPL40Q9NQ50 206 aaKnown RBP12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 HAUS2Q9NVX0 235 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 GOLGA6AQ9NYA3 693 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 KLQ9UEF7 1012 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 AMACRQ9UHK6 382 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 CD84Q9UIB8 345 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 MOSPD1Q9UJG1 213 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 ZMIZ1Q9ULJ6 1067 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 PPIL1Q9Y3C6 166 aa12.86□□□□□ -0.35
TRAPPC4-205ENST00000525079 CSNK1G3Q9Y6M4 447 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms