RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 GATA5Q9BWX5 397 aaPredicted RBP15.32■□□□□ 0.04
BEST1-204ENST00000524926 NMUR2Q9GZQ4 415 aa15.32■□□□□ 0.04
BEST1-204ENST00000524926 ACSS2Q9NR19 701 aa15.32■□□□□ 0.04
BEST1-204ENST00000524926 KIAA1522Q9P206 1035 aaPredicted RBP15.32■□□□□ 0.04
BEST1-204ENST00000524926 RIMKLBQ9ULI2 386 aa15.32■□□□□ 0.04
BEST1-204ENST00000524926 CCL26Q9Y258 94 aa15.32■□□□□ 0.04
BEST1-204ENST00000524926 FCHO1O14526 889 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 H2AFYO75367 372 aaKnown RBP15.31■□□□□ 0.04
BEST1-204ENST00000524926 CYBBP04839 570 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 ZNF140P52738 457 aaPredicted RBP15.31■□□□□ 0.04
BEST1-204ENST00000524926 EPHB1P54762 984 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 LMAN2Q12907 356 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 SEMA3AQ14563 771 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 PTPRRQ15256 657 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 FAM83EQ2M2I3 478 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 CTC1Q2NKJ3 1217 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 MPP7Q5T2T1 576 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 UBE2Q1Q7Z7E8 422 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 GPR150Q8NGU9 434 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 OR6K2Q8NGY2 324 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 SHKBP1Q8TBC3 707 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 SCG3Q8WXD2 468 aaKnown RBP15.31■□□□□ 0.04
BEST1-204ENST00000524926 HERVK_113Q902F9 699 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 SGF29Q96ES7 293 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 MRPL46Q9H2W6 279 aaKnown RBP15.31■□□□□ 0.04
BEST1-204ENST00000524926 SAR1AQ9NR31 198 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 MAN1C1Q9NR34 630 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 ARHGEF3Q9NR81 526 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 PCDHB9Q9Y5E1 797 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 MYO7AQ13402 2215 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 PRSS56P0CW18 603 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 CCDC166P0CW27 439 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 PTPN2P17706 415 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 GRIA4P48058 902 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 KPNA2P52292 529 aaKnown RBP15.31■□□□□ 0.04
BEST1-204ENST00000524926 NAGLUP54802 743 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 CDKN2DP55273 166 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 TEAD2Q15562 447 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 AGAP9Q5VTM2 703 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 CYB5D1Q6P9G0 228 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 SPRED2Q7Z698 418 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 PAF1Q8N7H5 531 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 PHOSPHO2Q8TCD6 241 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 ACDQ96AP0 544 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 MRPL57Q9BQC6 102 aaKnown RBP15.31■□□□□ 0.04
BEST1-204ENST00000524926 SIKE1Q9BRV8 207 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 ARMCX1Q9P291 453 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 DNMT3BQ9UBC3 853 aaKnown RBP15.31■□□□□ 0.04
BEST1-204ENST00000524926 ARHGAP26Q9UNA1 814 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 STK38LQ9Y2H1 464 aa15.31■□□□□ 0.04
BEST1-204ENST00000524926 FNDC3AQ9Y2H6 1198 aaKnown RBP15.31■□□□□ 0.04
BEST1-204ENST00000524926 PDE4DIPQ5VU43 2346 aa15.3■□□□□ 0.04
BEST1-204ENST00000524926 TMEM114B3SHH9 223 aa15.3■□□□□ 0.04
BEST1-204ENST00000524926 TARM1B6A8C7 271 aa15.3■□□□□ 0.04
BEST1-204ENST00000524926 SMAD6O43541 496 aaKnown RBP15.3■□□□□ 0.04
BEST1-204ENST00000524926 LTA4HP09960 611 aaKnown RBP15.3■□□□□ 0.04
BEST1-204ENST00000524926 LPOP22079 712 aaPredicted RBP15.3■□□□□ 0.04
BEST1-204ENST00000524926 CD70P32970 193 aa15.3■□□□□ 0.04
BEST1-204ENST00000524926 IRS1P35568 1242 aa15.3■□□□□ 0.04
BEST1-204ENST00000524926 RASSF2P50749 326 aa15.3■□□□□ 0.04
BEST1-204ENST00000524926 C1QTNF8P60827 252 aa15.3■□□□□ 0.04
BEST1-204ENST00000524926 FAM45BPQ6NSW5 357 aa15.3■□□□□ 0.04
BEST1-204ENST00000524926 CMTM8Q8IZV2 173 aa15.3■□□□□ 0.04
BEST1-204ENST00000524926 ZNF781Q8N8C0 355 aa15.3■□□□□ 0.04
BEST1-204ENST00000524926 FIBINQ8TAL6 211 aa15.3■□□□□ 0.04
BEST1-204ENST00000524926 FAM45AQ8TCE6 357 aa15.3■□□□□ 0.04
BEST1-204ENST00000524926 AGR3Q8TD06 166 aa15.3■□□□□ 0.04
BEST1-204ENST00000524926 BPIFA1Q9NP55 256 aa15.3■□□□□ 0.04
BEST1-204ENST00000524926 IGSF5Q9NSI5 407 aa15.3■□□□□ 0.04
BEST1-204ENST00000524926 A0A0U1RQS6 177 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 LINC01553A4QN01 128 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 DLX3O60479 287 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 PFKLP17858 780 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 ALDH18A1P54886 795 aaKnown RBP15.29■□□□□ 0.04
BEST1-204ENST00000524926 ELF3P78545 371 aaPredicted RBP15.29■□□□□ 0.04
BEST1-204ENST00000524926 USP4Q13107 963 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 KLC3Q6P597 504 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 KLC4Q9NSK0 619 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 ARL8BQ9NVJ2 186 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.29■□□□□ 0.04
BEST1-204ENST00000524926 EVLQ9UI08 416 aaPredicted RBP15.29■□□□□ 0.04
BEST1-204ENST00000524926 MTCL1Q9Y4B5 1905 aaKnown RBP15.29■□□□□ 0.04
BEST1-204ENST00000524926 UBA6A0AVT1 1052 aaPredicted RBP15.29■□□□□ 0.04
BEST1-204ENST00000524926 CCDC22O60826 627 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 RHOP08100 348 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 OGNP20774 298 aaKnown RBP15.29■□□□□ 0.04
BEST1-204ENST00000524926 STC1P52823 247 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 PRKAA2P54646 552 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 ZNF549Q6P9A3 640 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 AFTPHQ6ULP2 937 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 PIM3Q86V86 326 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 CAMK1DQ8IU85 385 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 ANKRD49Q8WVL7 239 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 RPL10LQ96L21 214 aaKnown RBP15.29■□□□□ 0.04
BEST1-204ENST00000524926 TUBB6Q9BUF5 446 aa15.29■□□□□ 0.04
BEST1-204ENST00000524926 STX7O15400 261 aaKnown RBP15.28■□□□□ 0.04
BEST1-204ENST00000524926 CHRNGP07510 517 aa15.28■□□□□ 0.04
BEST1-204ENST00000524926 KRT16P08779 473 aa15.28■□□□□ 0.04
BEST1-204ENST00000524926 HSPA1AP0DMV8 641 aaKnown RBP15.28■□□□□ 0.04
BEST1-204ENST00000524926 HSPA1BP0DMV9 641 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms