RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 NIPAL4Q0D2K0 466 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 GPS2Q13227 327 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 CTTNQ14247 550 aaKnown RBP3.92□□□□□ -1.78
PCM1-220ENST00000523896 MED22Q15528 200 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 KRT24Q2M2I5 525 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 COL28A1Q2UY09 1125 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 KLHL22Q53GT1 634 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 FSCBQ5H9T9 825 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 CXorf66Q5JRM2 361 aaPredicted RBP3.92□□□□□ -1.78
PCM1-220ENST00000523896 C6orf141Q5SZD1 244 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 FNBP1LQ5T0N5 605 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 SPATA1Q5VX52 437 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 ITPRIPL1Q6GPH6 555 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 PLEKHA7Q6IQ23 1121 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 TTI2Q6NXR4 508 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 FBXO46Q6PJ61 603 aaPredicted RBP3.92□□□□□ -1.78
PCM1-220ENST00000523896 SARM1Q6SZW1 724 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 CLEC4GQ6UXB4 293 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 DLK2Q6UY11 383 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 CCDC129Q6ZRS4 1044 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 ZBTB2Q8N680 514 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 PDILTQ8N807 584 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 MIGA1Q8NAN2 632 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 SCCPDHQ8NBX0 429 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 ARRDC2Q8TBH0 407 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 TRIB2Q92519 343 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 THOC3Q96J01 351 aaKnown RBP3.92□□□□□ -1.78
PCM1-220ENST00000523896 SLC41A2Q96JW4 573 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 BARD1Q99728 777 aaKnown RBP3.92□□□□□ -1.78
PCM1-220ENST00000523896 EIF2B3Q9NR50 452 aaKnown RBP3.92□□□□□ -1.78
PCM1-220ENST00000523896 CISD1Q9NZ45 108 aaKnown RBP3.92□□□□□ -1.78
PCM1-220ENST00000523896 FBXO2Q9UK22 296 aaPredicted RBP3.92□□□□□ -1.78
PCM1-220ENST00000523896 SLC45A1Q9Y2W3 748 aa3.92□□□□□ -1.78
PCM1-220ENST00000523896 IGHV4-28A0A0C4DH34 117 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 TMEM202A6NGA9 273 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 FAM90A8PA6NJQ4 464 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 A8MZ25 164 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 INAFM1C9JVW0 142 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 ASAP2O43150 1006 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 DOK2O60496 412 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 TIPRLO75663 272 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 FAM90A13PP0C7W8 464 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 FAM90A24PP0C7X0 464 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 T-ENOLP0DO92 83 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 KRT10P13645 584 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 HOXD3P31249 432 aaPredicted RBP3.91□□□□□ -1.78
PCM1-220ENST00000523896 F2RL1P55085 397 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 MEA1Q16626 185 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 FAM205BPQ63HN1 556 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 TMED8Q6PL24 325 aaPredicted RBP3.91□□□□□ -1.78
PCM1-220ENST00000523896 CRELD2Q6UXH1 353 aaPredicted RBP3.91□□□□□ -1.78
PCM1-220ENST00000523896 IKBIPQ70UQ0 350 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 MTSS1LQ765P7 747 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 FASTKD5Q7L8L6 764 aaKnown RBP3.91□□□□□ -1.78
PCM1-220ENST00000523896 WDR63Q8IWG1 891 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 AADATQ8N5Z0 425 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 AGBL3Q8NEM8 1001 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 POMGNT1Q8WZA1 660 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 ERGIC1Q969X5 290 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 ARHGEF26Q96DR7 871 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 LYZL4Q96KX0 146 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 MARK4Q96L34 752 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 ZNF570Q96NI8 536 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 WDFY2Q96P53 400 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 TMEM47Q9BQJ4 181 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 C1QTNF5Q9BXJ0 243 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 DCLK3Q9C098 648 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 POLR1BQ9H9Y6 1135 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 MKKSQ9NPJ1 570 aaPredicted RBP3.91□□□□□ -1.78
PCM1-220ENST00000523896 SEPT11Q9NVA2 429 aaKnown RBP3.91□□□□□ -1.78
PCM1-220ENST00000523896 OR6C3Q9NZP0 311 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 ZNF580Q9UK33 172 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 FBXO9Q9UK97 447 aaPredicted RBP3.91□□□□□ -1.78
PCM1-220ENST00000523896 CORO1CQ9ULV4 474 aaPredicted RBP3.91□□□□□ -1.78
PCM1-220ENST00000523896 INSL5Q9Y5Q6 135 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 STON1Q9Y6Q2 735 aa3.91□□□□□ -1.78
PCM1-220ENST00000523896 FAM237AA0A1B0GTK4 181 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 A0A1B0GVM2 712 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 A0A1B0GVT2 93 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 OR6C75A6NL08 312 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 TIMM23O14925 209 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 ALPLP05186 524 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 ZNF182P17025 639 aaPredicted RBP3.9□□□□□ -1.79
PCM1-220ENST00000523896 RAD23BP54727 409 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 LINC00205P59089 165 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 ABATP80404 500 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 Q0VFX4 171 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 PRKG2Q13237 762 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 NAE1Q13564 534 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 NEDD9Q14511 834 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 SOWAHCQ53LP3 525 aaPredicted RBP3.9□□□□□ -1.79
PCM1-220ENST00000523896 PPP6R3Q5H9R7 873 aaPredicted RBP3.9□□□□□ -1.79
PCM1-220ENST00000523896 ANKRD54Q6NXT1 300 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 KLHL35Q6PF15 583 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 BRINP3Q76B58 766 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 SHFQ7M4L6 423 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 RPAP2Q8IXW5 612 aaPredicted RBP3.9□□□□□ -1.79
PCM1-220ENST00000523896 PELI3Q8N2H9 469 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 WDTC1Q8N5D0 677 aa3.9□□□□□ -1.79
PCM1-220ENST00000523896 SCFD2Q8WU76 684 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms