RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 ZNF211Q13398 564 aaPredicted RBP15.17■□□□□ 0.02
PCM1-218ENST00000523055 GRM3Q14832 879 aa15.17■□□□□ 0.02
PCM1-218ENST00000523055 ZNF542PQ5EBM4 170 aa15.17■□□□□ 0.02
PCM1-218ENST00000523055 CFAP58Q5T655 872 aa15.17■□□□□ 0.02
PCM1-218ENST00000523055 Q6ZSR6 202 aa15.17■□□□□ 0.02
PCM1-218ENST00000523055 OXR1Q8N573 874 aa15.17■□□□□ 0.02
PCM1-218ENST00000523055 CXorf40AQ8TE69 158 aa15.17■□□□□ 0.02
PCM1-218ENST00000523055 ZNF641Q96N77 438 aaPredicted RBP15.17■□□□□ 0.02
PCM1-218ENST00000523055 MGME1Q9BQP7 344 aa15.17■□□□□ 0.02
PCM1-218ENST00000523055 DPH1Q9BZG8 443 aa15.17■□□□□ 0.02
PCM1-218ENST00000523055 TRIM4Q9C037 500 aa15.17■□□□□ 0.02
PCM1-218ENST00000523055 NOD2Q9HC29 1040 aa15.17■□□□□ 0.02
PCM1-218ENST00000523055 MBNL1Q9NR56 388 aaKnown RBP15.17■□□□□ 0.02
PCM1-218ENST00000523055 GPR27Q9NS67 375 aa15.17■□□□□ 0.02
PCM1-218ENST00000523055 LCMT1Q9UIC8 334 aa15.17■□□□□ 0.02
PCM1-218ENST00000523055 SALL4Q9UJQ4 1053 aa15.17■□□□□ 0.02
PCM1-218ENST00000523055 PCDHGC4Q9Y5F7 938 aa15.17■□□□□ 0.02
PCM1-218ENST00000523055 PCDHA13Q9Y5I0 950 aa15.17■□□□□ 0.02
PCM1-218ENST00000523055 A6NNZ2 444 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 RIOK3O14730 519 aaKnown RBP15.16■□□□□ 0.02
PCM1-218ENST00000523055 TERTO14746 1132 aaKnown RBP15.16■□□□□ 0.02
PCM1-218ENST00000523055 OPA1O60313 960 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 USP12O75317 370 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 TM7SF2O76062 418 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 KRT1P04264 644 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 FECHP22830 423 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 XPAP23025 273 aaPredicted RBP15.16■□□□□ 0.02
PCM1-218ENST00000523055 ARHGAP25P42331 645 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 MMP13P45452 471 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 AP1S1P61966 158 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 BCL2L1Q07817 233 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 NSUN2Q08J23 767 aaKnown RBP eCLIP15.16■□□□□ 0.02
PCM1-218ENST00000523055 RALGDSQ12967 914 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 SGCGQ13326 291 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 IHHQ14623 411 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 TCEAL1Q15170 157 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 BRAT1Q6PJG6 821 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 RAD9BQ6WBX8 426 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 KYAT3Q6YP21 454 aaKnown RBP15.16■□□□□ 0.02
PCM1-218ENST00000523055 LSMEM2Q8N112 164 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.16■□□□□ 0.02
PCM1-218ENST00000523055 PLD5Q8N7P1 536 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 EXD3Q8N9H8 876 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 TP53I13Q8NBR0 393 aaPredicted RBP15.16■□□□□ 0.02
PCM1-218ENST00000523055 CENPTQ96BT3 561 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 RNF157Q96PX1 679 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 PANX2Q96RD6 677 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 POLR1BQ9H9Y6 1135 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 NT5MQ9NPB1 228 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 DTLQ9NZJ0 730 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 ATP8A1Q9Y2Q0 1164 aa15.16■□□□□ 0.02
PCM1-218ENST00000523055 REXO2Q9Y3B8 237 aaKnown RBP15.16■□□□□ 0.02
PCM1-218ENST00000523055 LY6G6EA0A0G2JKS1 128 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 A8MX80 341 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 LZTS3O60299 673 aaPredicted RBP15.15■□□□□ 0.02
PCM1-218ENST00000523055 MAGEC1O60732 1142 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 NOP2P46087 812 aaKnown RBP15.15■□□□□ 0.02
PCM1-218ENST00000523055 MARCKSL1P49006 195 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 ELP6Q0PNE2 266 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 TRAF2Q12933 501 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 PTPRRQ15256 657 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 IRF4Q15306 451 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 LLGL1Q15334 1064 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 TMEM52BQ4KMG9 183 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 MARC1Q5VT66 337 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 IGF2-ASQ6U949 168 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 NPNTQ6UXI9 565 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 PRICKLE2Q7Z3G6 844 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 MAP7D3Q8IWC1 876 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 CCDC170Q8IYT3 715 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 PAF1Q8N7H5 531 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 PDCD6IPQ8WUM4 868 aaKnown RBP15.15■□□□□ 0.02
PCM1-218ENST00000523055 RNF25Q96BH1 459 aaPredicted RBP15.15■□□□□ 0.02
PCM1-218ENST00000523055 PRR11Q96HE9 360 aaPredicted RBP15.15■□□□□ 0.02
PCM1-218ENST00000523055 NUDCD1Q96RS6 583 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 UCKL1Q9NWZ5 548 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 HS3ST3A1Q9Y663 406 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 U3KQA8 63 aa15.15■□□□□ 0.02
PCM1-218ENST00000523055 KIF26BQ2KJY2 2108 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 NOTCH2Q04721 2471 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 SPTAN1Q13813 2472 aaKnown RBP15.14■□□□□ 0.01
PCM1-218ENST00000523055 FPGTO14772 594 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 SPOPO43791 374 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 NDUFA10O95299 355 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 CYLC1P35663 651 aaPredicted RBP15.14■□□□□ 0.01
PCM1-218ENST00000523055 LIG3P49916 1009 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 RENBPP51606 427 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 PFN3P60673 137 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 PDE1CQ14123 709 aaPredicted RBP15.14■□□□□ 0.01
PCM1-218ENST00000523055 FZD2Q14332 565 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 NYAP1Q6ZVC0 841 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 TEX26Q8N6G2 289 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 ACRBPQ8NEB7 543 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 DENND6BQ8NEG7 585 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 OR4C6Q8NH72 309 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 HCAR2Q8TDS4 363 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 ASB12Q8WXK4 309 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 LENG8Q96PV6 779 aaPredicted RBP15.14■□□□□ 0.01
PCM1-218ENST00000523055 SMIM14Q96QK8 99 aa15.14■□□□□ 0.01
PCM1-218ENST00000523055 KLF15Q9UIH9 416 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms