RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 BIRC2Q13490 618 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 AUHQ13825 339 aaKnown RBP6.34□□□□□ -1.39
PABPC1-220ENST00000522658 POLD3Q15054 466 aaPredicted RBP6.34□□□□□ -1.39
PABPC1-220ENST00000522658 ZNF284Q2VY69 593 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 ZCWPW2Q504Y3 356 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 EFHC1Q5JVL4 640 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 CFAP58Q5T655 872 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 ACBD5Q5T8D3 534 aaPredicted RBP6.34□□□□□ -1.39
PABPC1-220ENST00000522658 PIP5KL1Q5T9C9 394 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 FAXCQ5TGI0 409 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 CDCP2Q5VXM1 449 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 SLC6A19Q695T7 634 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 RETSATQ6NUM9 610 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 C22orf39Q6P5X5 142 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 KRBA2Q6ZNG9 492 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 GCNT7Q6ZNI0 430 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 BEND5Q7L4P6 421 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 RRAGAQ7L523 313 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 ABI3BPQ7Z7G0 1075 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 C14orf80Q86SX3 495 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 MCATQ8IVS2 390 aaKnown RBP6.34□□□□□ -1.39
PABPC1-220ENST00000522658 SLC25A45Q8N413 288 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 FBXO39Q8N4B4 442 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 PAF1Q8N7H5 531 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 DCAF4L2Q8NA75 395 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 MSANTD4Q8NCY6 345 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 TMIEQ8NEW7 156 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 ATL2Q8NHH9 583 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 CXorf40AQ8TE69 158 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 FRS2Q8WU20 508 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 SMARCE1Q969G3 411 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 SGF29Q96ES7 293 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 SLC39A13Q96H72 371 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 LMLNQ96KR4 655 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 FAM81BQ96LP2 452 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 SLC46A1Q96NT5 459 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 GFM1Q96RP9 751 aaKnown RBP6.34□□□□□ -1.39
PABPC1-220ENST00000522658 DPH2Q9BQC3 489 aaPredicted RBP6.34□□□□□ -1.39
PABPC1-220ENST00000522658 CCDC3Q9BQI4 270 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 SLC17A9Q9BYT1 436 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 SEMA4CQ9C0C4 833 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 SCAND2PQ9GZW5 306 aaPredicted RBP6.34□□□□□ -1.39
PABPC1-220ENST00000522658 THAP9Q9H5L6 903 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 ZDHHC6Q9H6R6 413 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 ASCL3Q9NQ33 180 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 IL17BQ9UHF5 180 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 RCOR1Q9UKL0 485 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 HPCAL4Q9UM19 191 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 COQ4Q9Y3A0 265 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 CSNK1G3Q9Y6M4 447 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 MYLKQ15746 1914 aa6.34□□□□□ -1.39
PABPC1-220ENST00000522658 ASH1LQ9NR48 2969 aaKnown RBP6.33□□□□□ -1.4
PABPC1-220ENST00000522658 SPTY2D1-AS1A0A0U1RR47 76 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 BICDL2A1A5D9 508 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 EME2A4GXA9 379 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-220ENST00000522658 ETV2O00321 342 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-220ENST00000522658 TPP1O14773 563 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 P4HA2O15460 535 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 ZW10O43264 779 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 ENDOD1O94919 500 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 ZNF202O95125 648 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 FGFR1OPO95684 399 aaKnown RBP6.33□□□□□ -1.4
PABPC1-220ENST00000522658 CSF2P04141 144 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 PGRP06401 933 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 ALPIP09923 528 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 SRCP12931 536 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 ADRB3P13945 408 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 NME1P15531 152 aaKnown RBP6.33□□□□□ -1.4
PABPC1-220ENST00000522658 TGM2P21980 687 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 HTR1BP28222 390 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 OR1E1P30953 314 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 ETFBP38117 255 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 PRCPP42785 496 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 SULT1E1P49888 294 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 HK2P52789 917 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 PLK1P53350 603 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 GEMIN4P57678 1058 aaKnown RBP6.33□□□□□ -1.4
PABPC1-220ENST00000522658 RAD51Q06609 339 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 PDCLQ13371 301 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 ELOCQ15369 112 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 MEA1Q16626 185 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 ZNF658Q5TYW1 1059 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-220ENST00000522658 SYPL2Q5VXT5 272 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 SEL1L3Q68CR1 1132 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 KLHL10Q6JEL2 608 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 CXorf57Q6NSI4 855 aaKnown RBP6.33□□□□□ -1.4
PABPC1-220ENST00000522658 FBXL22Q6P050 247 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 PCSK4Q6UW60 755 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 ENOSF1Q7L5Y1 443 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 TFAP2DQ7Z6R9 452 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 SETD3Q86TU7 594 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-220ENST00000522658 CREBRFQ8IUR6 639 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 PHACTR4Q8IZ21 702 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 SLC22A18ASQ8N1D0 253 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 PCDH20Q8N6Y1 951 aaKnown RBP6.33□□□□□ -1.4
PABPC1-220ENST00000522658 DENND6BQ8NEG7 585 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 OR6C4Q8NGE1 309 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 TFAP2BQ92481 460 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 SLC35C1Q96A29 364 aa6.33□□□□□ -1.4
PABPC1-220ENST00000522658 RAB7BQ96AH8 199 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms