RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 SYCP1Q15431 976 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 MYLK3Q32MK0 819 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 ARL13BQ3SXY8 428 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 CT47A1Q5JQC4 288 aaPredicted RBP8.13□□□□□ -1.11
PVT1-213ENST00000522414 LRRC73Q5JTD7 316 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 ATXN7L2Q5T6C5 722 aaPredicted RBP8.13□□□□□ -1.11
PVT1-213ENST00000522414 MANEALQ5VSG8 457 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 CDKAL1Q5VV42 579 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 SCYL2Q6P3W7 929 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 WDR59Q6PJI9 974 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 ZNF783Q6ZMS7 281 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 PARS2Q7L3T8 475 aaKnown RBP8.13□□□□□ -1.11
PVT1-213ENST00000522414 PTAR1Q7Z6K3 402 aaPredicted RBP8.13□□□□□ -1.11
PVT1-213ENST00000522414 TTC7BQ86TV6 843 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 NLRP14Q86W24 1093 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 PCDH20Q8N6Y1 951 aaKnown RBP8.13□□□□□ -1.11
PVT1-213ENST00000522414 DCBLD1Q8N8Z6 715 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 OR4C6Q8NH72 309 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 APOLD1Q96LR9 279 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 KLF6Q99612 283 aaPredicted RBP8.13□□□□□ -1.11
PVT1-213ENST00000522414 CEP44Q9C0F1 390 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 KLC2Q9H0B6 622 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 NOL6Q9H6R4 1146 aaKnown RBP8.13□□□□□ -1.11
PVT1-213ENST00000522414 ZDHHC6Q9H6R6 413 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 ADAM22Q9P0K1 906 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 IPO11Q9UI26 975 aaKnown RBP8.13□□□□□ -1.11
PVT1-213ENST00000522414 ITM2BQ9Y287 266 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 SIK3Q9Y2K2 1263 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 PCDHB1Q9Y5F3 818 aa8.13□□□□□ -1.11
PVT1-213ENST00000522414 LY6G6EA0A0G2JKS1 128 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 SPTY2D1-AS1A0A0U1RR47 76 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 CPED1A4D0V7 1026 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 NEMP1O14524 444 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 SCAMP1O15126 338 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 INSIG1O15503 277 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 BUB1O43683 1085 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 KDELR3O43731 214 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 OPA1O60313 960 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 BRINP1O60477 761 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 POP4O95707 220 aaKnown RBP8.12□□□□□ -1.11
PVT1-213ENST00000522414 UGT2B4P06133 528 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 CKMT1AP12532 417 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 STAT1P42224 750 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 RPL7AP62424 266 aaKnown RBP8.12□□□□□ -1.11
PVT1-213ENST00000522414 E2F1Q01094 437 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 C1orf61Q13536 156 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 POLD3Q15054 466 aaPredicted RBP8.12□□□□□ -1.11
PVT1-213ENST00000522414 ZNF805Q5CZA5 627 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 ACBD5Q5T8D3 534 aaPredicted RBP8.12□□□□□ -1.11
PVT1-213ENST00000522414 ZNF677Q86XU0 584 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 ZNF354CQ86Y25 554 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 MSANTD4Q8NCY6 345 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 FAM172AQ8WUF8 416 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 RFFLQ8WZ73 363 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 FGF11Q92914 225 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 ISG20Q96AZ6 181 aaKnown RBP8.12□□□□□ -1.11
PVT1-213ENST00000522414 CENPTQ96BT3 561 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 NXPE2Q96DL1 559 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 NAF1Q96HR8 494 aaKnown RBP8.12□□□□□ -1.11
PVT1-213ENST00000522414 PPP1R16AQ96I34 528 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 KLHL32Q96NJ5 620 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 NRSN2Q9GZP1 204 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 MAGEH1Q9H213 219 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 TCEAL2Q9H3H9 227 aaPredicted RBP8.12□□□□□ -1.11
PVT1-213ENST00000522414 SOX17Q9H6I2 414 aaPredicted RBP8.12□□□□□ -1.11
PVT1-213ENST00000522414 MBNL1Q9NR56 388 aaKnown RBP8.12□□□□□ -1.11
PVT1-213ENST00000522414 TMEM248Q9NWD8 314 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 PNMA8BQ9ULN7 279 aaPredicted RBP8.12□□□□□ -1.11
PVT1-213ENST00000522414 HPCAL4Q9UM19 191 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 NEU3Q9UQ49 428 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 U3KQA8 63 aa8.12□□□□□ -1.11
PVT1-213ENST00000522414 SETXQ7Z333 2677 aaKnown RBP8.12□□□□□ -1.11
PVT1-213ENST00000522414 PIEZO2Q9H5I5 2752 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 FLNBO75369 2602 aaKnown RBP8.11□□□□□ -1.11
PVT1-213ENST00000522414 CXorf51AA0A1B0GTR3 108 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 NEMP2A6NFY4 417 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 SIGLEC16A6NMB1 481 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 A6NNZ2 444 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 FPGTO14772 594 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 TSPAN6O43657 245 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 AP1G1O43747 822 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 RAMP2O60895 175 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 GCATO75600 419 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 CSF2P04141 144 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 PRB1P04280 392 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 MPOP05164 745 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 ESRRAP11474 423 aaPredicted RBP8.11□□□□□ -1.11
PVT1-213ENST00000522414 GPD1P21695 349 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 PTPN9P43378 593 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 COPB1P53618 953 aaKnown RBP8.11□□□□□ -1.11
PVT1-213ENST00000522414 HNRNPKP61978 463 aaKnown RBP eCLIP8.11□□□□□ -1.115e-6■■■■□ 19.6
PVT1-213ENST00000522414 SNRPD1P62314 119 aaKnown RBP8.11□□□□□ -1.11
PVT1-213ENST00000522414 UBXN1Q04323 297 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 CCDC173Q0VFZ6 552 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 EIF2B5Q13144 721 aaKnown RBP8.11□□□□□ -1.11
PVT1-213ENST00000522414 PDE1CQ14123 709 aaPredicted RBP8.11□□□□□ -1.11
PVT1-213ENST00000522414 ELOAQ14241 798 aaKnown RBP8.11□□□□□ -1.11
PVT1-213ENST00000522414 ACAP1Q15027 740 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 CYTH1Q15438 398 aa8.11□□□□□ -1.11
PVT1-213ENST00000522414 CDKN3Q16667 212 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms