RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 WDR5BQ86VZ2 330 aa24.21■■□□□ 1.47
PVT1-212ENST00000521951 TOE1Q96GM8 510 aaKnown RBP24.21■■□□□ 1.47
PVT1-212ENST00000521951 KDM4CQ9H3R0 1056 aa24.21■■□□□ 1.47
PVT1-212ENST00000521951 ANKZF1Q9H8Y5 726 aa24.21■■□□□ 1.47
PVT1-212ENST00000521951 ZDHHC18Q9NUE0 388 aa24.21■■□□□ 1.47
PVT1-212ENST00000521951 BFARQ9NZS9 450 aa24.21■■□□□ 1.47
PVT1-212ENST00000521951 HACD3Q9P035 362 aa24.21■■□□□ 1.47
PVT1-212ENST00000521951 ZNF711Q9Y462 761 aa24.21■■□□□ 1.47
PVT1-212ENST00000521951 LRRK1Q38SD2 2015 aa24.21■■□□□ 1.47
PVT1-212ENST00000521951 TRPM6Q9BX84 2022 aa24.2■■□□□ 1.47
PVT1-212ENST00000521951 C1orf232A0A0U1RR37 186 aa24.2■■□□□ 1.47
PVT1-212ENST00000521951 AURKAO14965 403 aa24.2■■□□□ 1.47
PVT1-212ENST00000521951 PCDH8O95206 1070 aa24.2■■□□□ 1.47
PVT1-212ENST00000521951 CLDN7O95471 211 aa24.2■■□□□ 1.47
PVT1-212ENST00000521951 MGAT1P26572 445 aa24.2■■□□□ 1.47
PVT1-212ENST00000521951 POU6F1Q14863 301 aa24.2■■□□□ 1.47
PVT1-212ENST00000521951 ERCC6LQ2NKX8 1250 aa24.2■■□□□ 1.47
PVT1-212ENST00000521951 LRRC66Q68CR7 880 aa24.2■■□□□ 1.47
PVT1-212ENST00000521951 LIPIQ6XZB0 460 aa24.2■■□□□ 1.47
PVT1-212ENST00000521951 LYSMD3Q7Z3D4 306 aa24.2■■□□□ 1.47
PVT1-212ENST00000521951 BRSK1Q8TDC3 778 aa24.2■■□□□ 1.47
PVT1-212ENST00000521951 WRAP53Q9BUR4 548 aaKnown RBP24.2■■□□□ 1.47
PVT1-212ENST00000521951 TRABDQ9H4I3 376 aa24.2■■□□□ 1.47
PVT1-212ENST00000521951 TBC1D3DA0A087WVF3 549 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 TBC1D3IA0A087WXS9 549 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 TBC1D3EA0A087X179 549 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 TBC1D3KA0A087X1G2 549 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 TBC1D3FA6NER0 549 aaPredicted RBP24.2■■□□□ 1.46
PVT1-212ENST00000521951 FAM47DPA6NHR8 397 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 TBC1D3LB9A6J9 549 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 PPFIA2O75334 1257 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 TBC1D3HP0C7X1 549 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 CUL1Q13616 776 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 ARHGEF7Q14155 803 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 CNGA3Q16281 694 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 MSS51Q4VC12 460 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 TBC1D3GQ6DHY5 549 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 TBC1D3CQ6IPX1 549 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 LONP2Q86WA8 852 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 TBC1D3Q8IZP1 549 aaPredicted RBP24.2■■□□□ 1.46
PVT1-212ENST00000521951 TTC30BQ8N4P2 665 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 ZCCHC9Q8N567 271 aaKnown RBP24.2■■□□□ 1.46
PVT1-212ENST00000521951 OR2T34Q8NGX1 318 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 GPR63Q9BZJ6 419 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 ZFYVE1Q9HBF4 777 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 PREBQ9HCU5 417 aa24.2■■□□□ 1.46
PVT1-212ENST00000521951 CUL9Q8IWT3 2517 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 DOCK9Q9BZ29 2069 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 PRR23AA6NEV1 266 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 LRRC72A6NJI9 287 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 MMP20O60882 483 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 SEMA4FO95754 770 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 ZNF30P17039 623 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 LIG3P49916 1009 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 ARL4CP56559 192 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 CRADDP78560 199 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 PTSQ03393 145 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 HLTFQ14527 1009 aaKnown RBP eCLIP24.19■■□□□ 1.464e-7■■■□□ 15.7
PVT1-212ENST00000521951 ANGPT1Q15389 498 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 GLT6D1Q7Z4J2 308 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 TMC3Q7Z5M5 1100 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 PDIK1LQ8N165 341 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 CBARPQ8N350 705 aaPredicted RBP24.19■■□□□ 1.46
PVT1-212ENST00000521951 CXorf40AQ8TE69 158 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 EID2BQ96D98 161 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 SIGLEC10Q96LC7 697 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 FAM129AQ9BZQ8 928 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 IL22Q9GZX6 179 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 SYBUQ9NX95 663 aa24.19■■□□□ 1.46
PVT1-212ENST00000521951 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.19■■□□□ 1.464e-6■□□□□ 11.2
PVT1-212ENST00000521951 MBD1Q9UIS9 605 aaPredicted RBP24.19■■□□□ 1.46
PVT1-212ENST00000521951 SDR42E2A6NKP2 422 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 H0Y858 1186 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 RNGTTO60942 597 aaKnown RBP24.18■■□□□ 1.46
PVT1-212ENST00000521951 ELFN1P0C7U0 828 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 ECHS1P30084 290 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 SEPT6Q14141 434 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 TAF1AQ15573 450 aaPredicted RBP24.18■■□□□ 1.46
PVT1-212ENST00000521951 HIF1AQ16665 826 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 CCDC38Q502W7 563 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 NEK5Q6P3R8 708 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 AGGF1Q8N302 714 aaeCLIP24.18■■□□□ 1.468e-7■■■■□ 20.8
PVT1-212ENST00000521951 MPP5Q8N3R9 675 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 NELL1Q92832 810 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 SPACA7Q96KW9 195 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 RANBP9Q96S59 729 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 GPR174Q9BXC1 333 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 FAM126AQ9BYI3 521 aaPredicted RBP24.18■■□□□ 1.46
PVT1-212ENST00000521951 ZFR2Q9UPR6 939 aaKnown RBP24.18■■□□□ 1.46
PVT1-212ENST00000521951 KCTD3Q9Y597 815 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 ARL5AQ9Y689 179 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 ZNF318Q5VUA4 2279 aa24.18■■□□□ 1.46
PVT1-212ENST00000521951 GALR2O43603 387 aaPredicted RBP24.17■■□□□ 1.46
PVT1-212ENST00000521951 LDB2O43679 373 aa24.17■■□□□ 1.46
PVT1-212ENST00000521951 BANF1O75531 89 aa24.17■■□□□ 1.46
PVT1-212ENST00000521951 CRTAMO95727 393 aa24.17■■□□□ 1.46
PVT1-212ENST00000521951 ADRA1DP25100 572 aa24.17■■□□□ 1.46
PVT1-212ENST00000521951 STC1P52823 247 aa24.17■■□□□ 1.46
PVT1-212ENST00000521951 NUBP1P53384 320 aa24.17■■□□□ 1.46
PVT1-212ENST00000521951 DHX9Q08211 1270 aaKnown RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms