RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 TXNRD3NBQ6F5E7 133 aa25.4■■□□□ 1.66
VEGFA-220ENST00000519767 PNCKQ6P2M8 343 aa25.4■■□□□ 1.66
VEGFA-220ENST00000519767 FAM71BQ8TC56 605 aa25.4■■□□□ 1.66
VEGFA-220ENST00000519767 FUBP1Q96AE4 644 aaKnown RBP25.4■■□□□ 1.66
VEGFA-220ENST00000519767 NSMCE3Q96MG7 304 aa25.4■■□□□ 1.66
VEGFA-220ENST00000519767 CCDC3Q9BQI4 270 aa25.4■■□□□ 1.66
VEGFA-220ENST00000519767 MGME1Q9BQP7 344 aa25.4■■□□□ 1.66
VEGFA-220ENST00000519767 B4GALT6Q9UBX8 382 aa25.4■■□□□ 1.66
VEGFA-220ENST00000519767 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.4■■□□□ 1.665e-11■■■□□ 15.1
VEGFA-220ENST00000519767 BPTFQ12830 3046 aa25.39■■□□□ 1.66
VEGFA-220ENST00000519767 CELA2BP08218 269 aaPredicted RBP25.39■■□□□ 1.66
VEGFA-220ENST00000519767 IL4RP24394 825 aa25.39■■□□□ 1.66
VEGFA-220ENST00000519767 RBMS1P29558 406 aaKnown RBP25.39■■□□□ 1.66
VEGFA-220ENST00000519767 MMP13P45452 471 aa25.39■■□□□ 1.66
VEGFA-220ENST00000519767 PCDH19Q8TAB3 1148 aa25.39■■□□□ 1.66
VEGFA-220ENST00000519767 HIC2Q96JB3 615 aa25.39■■□□□ 1.66
VEGFA-220ENST00000519767 BTBD6Q96KE9 485 aa25.39■■□□□ 1.66
VEGFA-220ENST00000519767 COQ10AQ96MF6 247 aa25.39■■□□□ 1.66
VEGFA-220ENST00000519767 PRORYQ9H606 182 aa25.39■■□□□ 1.66
VEGFA-220ENST00000519767 THSD1Q9NS62 852 aa25.39■■□□□ 1.66
VEGFA-220ENST00000519767 LCMT1Q9UIC8 334 aa25.39■■□□□ 1.66
VEGFA-220ENST00000519767 LOC400499M0QZD8 3231 aa25.39■■□□□ 1.65
VEGFA-220ENST00000519767 TTC24A2A3L6 582 aaPredicted RBP25.38■■□□□ 1.65
VEGFA-220ENST00000519767 A8MX80 341 aa25.38■■□□□ 1.65
VEGFA-220ENST00000519767 CYP2A6P11509 494 aaPredicted RBP25.38■■□□□ 1.65
VEGFA-220ENST00000519767 KRT10P13645 584 aa25.38■■□□□ 1.65
VEGFA-220ENST00000519767 VIPR1P32241 457 aa25.38■■□□□ 1.65
VEGFA-220ENST00000519767 SSR1P43307 286 aaKnown RBP25.38■■□□□ 1.65
VEGFA-220ENST00000519767 CCDC173Q0VFZ6 552 aa25.38■■□□□ 1.65
VEGFA-220ENST00000519767 SPIDRQ14159 915 aa25.38■■□□□ 1.65
VEGFA-220ENST00000519767 CBARPQ8N350 705 aaPredicted RBP25.38■■□□□ 1.65
VEGFA-220ENST00000519767 PGBD5Q8N414 524 aa25.38■■□□□ 1.65
VEGFA-220ENST00000519767 PDCD6IPQ8WUM4 868 aaKnown RBP25.38■■□□□ 1.65
VEGFA-220ENST00000519767 ATXN7L3BQ96GX2 97 aa25.38■■□□□ 1.65
VEGFA-220ENST00000519767 LGMNQ99538 433 aa25.38■■□□□ 1.65
VEGFA-220ENST00000519767 WDR26Q9H7D7 661 aa25.38■■□□□ 1.65
VEGFA-220ENST00000519767 IFNKQ9P0W0 207 aa25.38■■□□□ 1.65
VEGFA-220ENST00000519767 PCDHGA8Q9Y5G5 932 aa25.38■■□□□ 1.65
VEGFA-220ENST00000519767 ENTPD2Q9Y5L3 495 aa25.38■■□□□ 1.65
VEGFA-220ENST00000519767 PTPRQQ9UMZ3 2332 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 TMEM202A6NGA9 273 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 TMX2-CTNND1H3BSU7 103 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 CPP00450 1065 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 GYPCP04921 128 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 GM2AP17900 193 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 CES1P23141 567 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 HNRNPH3P31942 346 aaKnown RBP25.37■■□□□ 1.65
VEGFA-220ENST00000519767 TSR1Q2NL82 804 aaKnown RBP25.37■■□□□ 1.65
VEGFA-220ENST00000519767 OGFOD3Q6PK18 319 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 CRTC1Q6UUV9 634 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 MAP7D3Q8IWC1 876 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 NDUFAF2Q8N183 169 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 TEX26Q8N6G2 289 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 OR1E3Q8WZA6 343 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 SCRN2Q96FV2 425 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 CRELD1Q96HD1 420 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 SLC46A1Q96NT5 459 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 SIRPGQ9P1W8 387 aa25.37■■□□□ 1.65
VEGFA-220ENST00000519767 PSMD11O00231 422 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 NTN3O00634 580 aaPredicted RBP25.36■■□□□ 1.65
VEGFA-220ENST00000519767 HEXIM1O94992 359 aaKnown RBP25.36■■□□□ 1.65
VEGFA-220ENST00000519767 CASP14P31944 242 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 MLLT3P42568 568 aaPredicted RBP25.36■■□□□ 1.65
VEGFA-220ENST00000519767 TLE3Q04726 772 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 ARMC12Q5T9G4 340 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 TAF8Q7Z7C8 310 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 SPACA3Q8IXA5 215 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 KYQ8NBH2 561 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 KCTD6Q8NC69 237 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 WDR36Q8NI36 951 aaKnown RBP25.36■■□□□ 1.65
VEGFA-220ENST00000519767 ZNF564Q8TBZ8 553 aaPredicted RBP25.36■■□□□ 1.65
VEGFA-220ENST00000519767 NUS1Q96E22 293 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 UBL7Q96S82 380 aaPredicted RBP25.36■■□□□ 1.65
VEGFA-220ENST00000519767 ASCL3Q9NQ33 180 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 HAUS2Q9NVX0 235 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 UVRAGQ9P2Y5 699 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 SATB2Q9UPW6 733 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 PPIL1Q9Y3C6 166 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 RAI2Q9Y5P3 530 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 BAHCC1Q9P281 2608 aa25.36■■□□□ 1.65
VEGFA-220ENST00000519767 EIF4E1BA6NMX2 242 aaKnown RBP25.35■■□□□ 1.65
VEGFA-220ENST00000519767 PGLSO95336 258 aa25.35■■□□□ 1.65
VEGFA-220ENST00000519767 COL9A2Q14055 689 aaPredicted RBP25.35■■□□□ 1.65
VEGFA-220ENST00000519767 PDK2Q15119 407 aa25.35■■□□□ 1.65
VEGFA-220ENST00000519767 CNGA3Q16281 694 aa25.35■■□□□ 1.65
VEGFA-220ENST00000519767 C3orf38Q5JPI3 329 aa25.35■■□□□ 1.65
VEGFA-220ENST00000519767 ARL14Q8N4G2 192 aa25.35■■□□□ 1.65
VEGFA-220ENST00000519767 FAM46DQ8NEK8 389 aa25.35■■□□□ 1.65
VEGFA-220ENST00000519767 GPR156Q8NFN8 814 aa25.35■■□□□ 1.65
VEGFA-220ENST00000519767 PDXPQ96GD0 296 aa25.35■■□□□ 1.65
VEGFA-220ENST00000519767 DPH1Q9BZG8 443 aa25.35■■□□□ 1.65
VEGFA-220ENST00000519767 FGF22Q9HCT0 170 aa25.35■■□□□ 1.65
VEGFA-220ENST00000519767 PHPT1Q9NRX4 125 aaPredicted RBP25.35■■□□□ 1.65
VEGFA-220ENST00000519767 CTTNBP2NLQ9P2B4 639 aa25.35■■□□□ 1.65
VEGFA-220ENST00000519767 RP1P56715 2156 aa25.35■■□□□ 1.65
VEGFA-220ENST00000519767 KALRNO60229 2985 aa25.35■■□□□ 1.65
VEGFA-220ENST00000519767 H2AFZP0C0S5 128 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 MYCLP1P12525 358 aaPredicted RBP25.34■■□□□ 1.65
VEGFA-220ENST00000519767 ARSEP51690 589 aa25.34■■□□□ 1.65
VEGFA-220ENST00000519767 UCNP55089 124 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 196.4 ms