RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 ZNF542PQ5EBM4 170 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 RNF187Q5TA31 235 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-207ENST00000518716 LCLAT1Q6UWP7 414 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 KYAT3Q6YP21 454 aaKnown RBP6.13□□□□□ -1.43
PABPC1-207ENST00000518716 USP53Q70EK8 1073 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 INTS8Q75QN2 995 aaKnown RBP6.13□□□□□ -1.43
PABPC1-207ENST00000518716 BEND5Q7L4P6 421 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 THAP5Q7Z6K1 395 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 B3GNT8Q7Z7M8 397 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 C14orf80Q86SX3 495 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 SULF2Q8IWU5 870 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 OR52K2Q8NGK3 314 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 WDR48Q8TAF3 677 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 UBA3Q8TBC4 463 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 GPBAR1Q8TDU6 330 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 DQX1Q8TE96 717 aaKnown RBP6.13□□□□□ -1.43
PABPC1-207ENST00000518716 CLEC4CQ8WTT0 213 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 OR8D1Q8WZ84 308 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 TFAP2BQ92481 460 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 KLK6Q92876 244 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 UBE2FQ969M7 185 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 ITFG2Q969R8 447 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 VOPP1Q96AW1 172 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 ARRDC3Q96B67 414 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 TBATAQ96M53 351 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 IPO9Q96P70 1041 aaKnown RBP6.13□□□□□ -1.43
PABPC1-207ENST00000518716 KLF6Q99612 283 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-207ENST00000518716 DDX50Q9BQ39 737 aaKnown RBP6.13□□□□□ -1.43
PABPC1-207ENST00000518716 FEM1AQ9BSK4 669 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 SUDS3Q9H7L9 328 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-207ENST00000518716 TMEM8AQ9HCN3 771 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 FZD3Q9NPG1 666 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 TMEM59LQ9UK28 342 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 PNMA8BQ9ULN7 279 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-207ENST00000518716 MTMR6Q9Y217 621 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 TLR6Q9Y2C9 796 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 MED13Q9UHV7 2174 aa6.13□□□□□ -1.43
PABPC1-207ENST00000518716 A0A1W2PQM1 296 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 CPED1A4D0V7 1026 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 SPTLC2O15270 562 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 POLR2DO15514 142 aaKnown RBP6.12□□□□□ -1.43
PABPC1-207ENST00000518716 SEMA7AO75326 666 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 PPFIA2O75334 1257 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 ZNF821O75541 412 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-207ENST00000518716 MOCS3O95396 460 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 MT-CO1P00395 513 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 LTFP02788 710 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 SETSIPP0DME0 302 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 PDGFRAP16234 1089 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 TACR2P21452 398 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 CASQ1P31415 396 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 AKT2P31751 481 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 CCKBRP32239 447 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 CASRP41180 1078 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 SLC8A3P57103 927 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 PFN3P60673 137 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 ZFP36L1Q07352 338 aaKnown RBP6.12□□□□□ -1.43
PABPC1-207ENST00000518716 EIF3IQ13347 325 aaKnown RBP6.12□□□□□ -1.43
PABPC1-207ENST00000518716 DRAP1Q14919 205 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-207ENST00000518716 NR0B2Q15466 257 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 DLG2Q15700 870 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 ZXDCQ2QGD7 858 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-207ENST00000518716 DEFB133Q30KQ1 61 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 C5orf22Q49AR2 442 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 ZNF385BQ569K4 471 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 SYPL2Q5VXT5 272 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 SEL1L3Q68CR1 1132 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 KRT39Q6A163 491 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 DSG4Q86SJ6 1040 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 PARGQ86W56 976 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 ANKRD13BQ86YJ7 626 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 SLC35F3Q8IY50 421 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 SIX6OS1Q8N1H7 587 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 SH2D3CQ8N5H7 860 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 C1orf131Q8NDD1 294 aaKnown RBP6.12□□□□□ -1.43
PABPC1-207ENST00000518716 TMIEQ8NEW7 156 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 OR2A12Q8NGT7 310 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 ZNF564Q8TBZ8 553 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-207ENST00000518716 ERCC4Q92889 916 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-207ENST00000518716 LENG8Q96PV6 779 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-207ENST00000518716 MYOCQ99972 504 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 SGPP1Q9BX95 441 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 SLC12A9Q9BXP2 914 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 CALN1Q9BXU9 219 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 HDAC8Q9BY41 377 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 IMPG2Q9BZV3 1241 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 B3GNT4Q9C0J1 378 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 DNAI2Q9GZS0 605 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 EPN3Q9H201 632 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 ADNPQ9H2P0 1102 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 TCEAL2Q9H3H9 227 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-207ENST00000518716 DNAJC28Q9NX36 388 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 RAB20Q9NX57 234 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 KIAA1257Q9ULG3 409 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 NAALADL1Q9UQQ1 740 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 HS3ST2Q9Y278 367 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 COQ4Q9Y3A0 265 aa6.12□□□□□ -1.43
PABPC1-207ENST00000518716 SDK2Q58EX2 2172 aa6.11□□□□□ -1.43
PABPC1-207ENST00000518716 VPS37CA5D8V6 355 aaPredicted RBP6.11□□□□□ -1.43
PABPC1-207ENST00000518716 A6NNZ2 444 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms