RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SCFD2Q8WU76 684 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 SH3GL2Q99962 352 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 IFIH1Q9BYX4 1025 aaKnown RBP4.6□□□□□ -1.67
SQLE-202ENST00000518604 SYNCQ9H7C4 482 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 DDX4Q9NQI0 724 aaKnown RBP4.6□□□□□ -1.67
SQLE-202ENST00000518604 CISD1Q9NZ45 108 aaKnown RBP4.6□□□□□ -1.67
SQLE-202ENST00000518604 FBXO9Q9UK97 447 aaPredicted RBP4.6□□□□□ -1.67
SQLE-202ENST00000518604 ERVK-11Q9UQG0 969 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 MTMR6Q9Y217 621 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 ADAM18Q9Y3Q7 739 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 PCSK5Q92824 1860 aa4.6□□□□□ -1.67
SQLE-202ENST00000518604 FSD2A1L4K1 749 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 MYO1GB0I1T2 1018 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 INAFM1C9JVW0 142 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 NDUFS3O75489 264 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 SLC25A12O75746 678 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 IGKV2-30P06310 120 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 KRT10P13645 584 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 DRG2P55039 364 aaKnown RBP4.59□□□□□ -1.67
SQLE-202ENST00000518604 ZBED6P86452 979 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 Q0VFX4 171 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 AIMP2Q13155 320 aaKnown RBP4.59□□□□□ -1.67
SQLE-202ENST00000518604 PRKG2Q13237 762 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 NAE1Q13564 534 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 HNF4GQ14541 408 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 ADIPOQQ15848 244 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 SOWAHCQ53LP3 525 aaPredicted RBP4.59□□□□□ -1.67
SQLE-202ENST00000518604 EFHC1Q5JVL4 640 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 METTL2BQ6P1Q9 378 aaKnown RBP4.59□□□□□ -1.67
SQLE-202ENST00000518604 PDXDC1Q6P996 788 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 SHFQ7M4L6 423 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 ARRDC2Q8TBH0 407 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 ARHGEF26Q96DR7 871 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 METTL2AQ96IZ6 378 aaKnown RBP4.59□□□□□ -1.67
SQLE-202ENST00000518604 HARBI1Q96MB7 349 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 NCAPGQ9BPX3 1015 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 TMEM47Q9BQJ4 181 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 TKTL2Q9H0I9 626 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 MKKSQ9NPJ1 570 aaPredicted RBP4.59□□□□□ -1.67
SQLE-202ENST00000518604 SEPT11Q9NVA2 429 aaKnown RBP4.59□□□□□ -1.67
SQLE-202ENST00000518604 CORO1CQ9ULV4 474 aaPredicted RBP4.59□□□□□ -1.67
SQLE-202ENST00000518604 PTGDR2Q9Y5Y4 395 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 STON1Q9Y6Q2 735 aa4.59□□□□□ -1.67
SQLE-202ENST00000518604 A0A1B0GVT2 93 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 AKR1B15C9JRZ8 316 aaPredicted RBP4.58□□□□□ -1.68
SQLE-202ENST00000518604 HCRTR2O43614 444 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 DOK2O60496 412 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 HNRNPCL1O60812 293 aaKnown RBP4.58□□□□□ -1.68
SQLE-202ENST00000518604 MLYCDO95822 493 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 GLUD1P00367 558 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 TM4SF1P30408 202 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 RPL3P39023 403 aaKnown RBP4.58□□□□□ -1.68
SQLE-202ENST00000518604 GLUD2P49448 558 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 METAP2P50579 478 aaKnown RBP eCLIP4.58□□□□□ -1.68
SQLE-202ENST00000518604 ABATP80404 500 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 SORDQ00796 357 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 ECT2LQ008S8 904 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 PDE1CQ14123 709 aaPredicted RBP4.58□□□□□ -1.68
SQLE-202ENST00000518604 MED22Q15528 200 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 COL28A1Q2UY09 1125 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 ZNF260Q3ZCT1 412 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 CXorf66Q5JRM2 361 aaPredicted RBP4.58□□□□□ -1.68
SQLE-202ENST00000518604 AWAT2Q6E213 333 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 C8orf82Q6P1X6 216 aaPredicted RBP4.58□□□□□ -1.68
SQLE-202ENST00000518604 KLHL35Q6PF15 583 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 FBXO46Q6PJ61 603 aaPredicted RBP4.58□□□□□ -1.68
SQLE-202ENST00000518604 CLEC4GQ6UXB4 293 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 CRELD2Q6UXH1 353 aaPredicted RBP4.58□□□□□ -1.68
SQLE-202ENST00000518604 C9orf47Q6ZRZ4 202 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 MTSS1LQ765P7 747 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 FASTKD5Q7L8L6 764 aaKnown RBP4.58□□□□□ -1.68
SQLE-202ENST00000518604 TICAM1Q8IUC6 712 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 HACE1Q8IYU2 909 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 PRR26Q8N8Z3 221 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 OR14A16Q8NHC5 309 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 CCDC34Q96HJ3 373 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 BARD1Q99728 777 aaKnown RBP4.58□□□□□ -1.68
SQLE-202ENST00000518604 SH2D4AQ9H788 454 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 WDR26Q9H7D7 661 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 KAT14Q9H8E8 782 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 POLR1BQ9H9Y6 1135 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 RRP7BPQ9NSQ0 103 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 NSMCE4AQ9NXX6 385 aa4.58□□□□□ -1.68
SQLE-202ENST00000518604 AGO1Q9UL18 857 aaKnown RBP4.58□□□□□ -1.68
SQLE-202ENST00000518604 ATXN2Q99700 1313 aaKnown RBP4.57□□□□□ -1.68
SQLE-202ENST00000518604 IFNL4K9M1U5 179 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 SNAP23O00161 211 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 AP3D1O14617 1153 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 HSPA12AO43301 675 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 DAB1O75553 588 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 ALOX12P18054 663 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 MAOAP21397 527 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 MAPK4P31152 587 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 HNRNPH1P31943 449 aaKnown RBP4.57□□□□□ -1.68
SQLE-202ENST00000518604 ARRB2P32121 409 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 PPARGP37231 505 aaPredicted RBP4.57□□□□□ -1.68
SQLE-202ENST00000518604 PSMB10P40306 273 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 MXI1P50539 228 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 F2RL1P55085 397 aa4.57□□□□□ -1.68
SQLE-202ENST00000518604 TFAP4Q01664 338 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms