RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 HNF1BP35680 557 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 RABIFP47224 123 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 PFN3P60673 137 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 ARHGEF7Q14155 803 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 LRRC14Q15048 493 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 IRF4Q15306 451 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 WSCD2Q2TBF2 565 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 Q6ZSR6 202 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 DCP2Q8IU60 420 aaKnown RBP22.05■■□□□ 1.12
VEGFA-217ENST00000518538 OXR1Q8N573 874 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 SLC35B2Q8TB61 432 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 FCRL5Q96RD9 977 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 TRIB3Q96RU7 358 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 ELF4Q99607 663 aaPredicted RBP22.05■■□□□ 1.12
VEGFA-217ENST00000518538 MBNL1Q9NR56 388 aaKnown RBP22.05■■□□□ 1.12
VEGFA-217ENST00000518538 GPR27Q9NS67 375 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 TM7SF3Q9NS93 570 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 DNPEPQ9ULA0 475 aa22.05■■□□□ 1.12
VEGFA-217ENST00000518538 R3HDM2Q9Y2K5 976 aaKnown RBP22.05■■□□□ 1.12
VEGFA-217ENST00000518538 PSMD11O00231 422 aa22.04■■□□□ 1.12
VEGFA-217ENST00000518538 MT-CYBP00156 380 aaPredicted RBP22.04■■□□□ 1.12
VEGFA-217ENST00000518538 GM2AP17900 193 aa22.04■■□□□ 1.12
VEGFA-217ENST00000518538 CCT8P50990 548 aa22.04■■□□□ 1.12
VEGFA-217ENST00000518538 ACOX1Q15067 660 aa22.04■■□□□ 1.12
VEGFA-217ENST00000518538 PTPRRQ15256 657 aa22.04■■□□□ 1.12
VEGFA-217ENST00000518538 TSPAN33Q86UF1 283 aa22.04■■□□□ 1.12
VEGFA-217ENST00000518538 COQ10AQ96MF6 247 aa22.04■■□□□ 1.12
VEGFA-217ENST00000518538 LYSMD1Q96S90 227 aa22.04■■□□□ 1.12
VEGFA-217ENST00000518538 FRMD8P1Q9BZ68 369 aaPredicted RBP22.04■■□□□ 1.12
VEGFA-217ENST00000518538 GBA3Q9H227 469 aa22.04■■□□□ 1.12
VEGFA-217ENST00000518538 USP29Q9HBJ7 922 aa22.04■■□□□ 1.12
VEGFA-217ENST00000518538 TRMT1Q9NXH9 659 aaKnown RBP22.04■■□□□ 1.12
VEGFA-217ENST00000518538 FAM153AQ9UHL3 310 aa22.04■■□□□ 1.12
VEGFA-217ENST00000518538 RSPH14Q9UHP6 348 aa22.04■■□□□ 1.12
VEGFA-217ENST00000518538 JRKLQ9Y4A0 524 aa22.04■■□□□ 1.12
VEGFA-217ENST00000518538 DMXL1Q9Y485 3027 aa22.04■■□□□ 1.12
VEGFA-217ENST00000518538 A0A1B0GTQ1 180 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 ANKRD66B4E2M5 251 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 TOR1BO14657 336 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 CD59P13987 128 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 ZNF30P17039 623 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 CDK18Q07002 472 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 PCSK7Q16549 785 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 QPCTQ16769 361 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 ITPRIPL1Q6GPH6 555 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 CRTC1Q6UUV9 634 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 SLC22A18ASQ8N1D0 253 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 CBARPQ8N350 705 aaPredicted RBP22.03■■□□□ 1.12
VEGFA-217ENST00000518538 IFT43Q96FT9 208 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 SPATA13Q96N96 652 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 SMIM14Q96QK8 99 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 MLPHQ9BV36 600 aaPredicted RBP22.03■■□□□ 1.12
VEGFA-217ENST00000518538 KCTD5Q9NXV2 234 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 UBP1Q9NZI7 540 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 PCDHGB2Q9Y5G2 931 aa22.03■■□□□ 1.12
VEGFA-217ENST00000518538 LRRK1Q38SD2 2015 aa22.02■■□□□ 1.12
VEGFA-217ENST00000518538 TP53BP1Q12888 1972 aaPredicted RBP22.02■■□□□ 1.12
VEGFA-217ENST00000518538 YKT6O15498 198 aa22.02■■□□□ 1.12
VEGFA-217ENST00000518538 PMPCBO75439 489 aa22.02■■□□□ 1.12
VEGFA-217ENST00000518538 ARRB1P49407 418 aaPredicted RBP22.02■■□□□ 1.12
VEGFA-217ENST00000518538 YPEL5P62699 121 aa22.02■■□□□ 1.12
VEGFA-217ENST00000518538 GALNT3Q14435 633 aa22.02■■□□□ 1.12
VEGFA-217ENST00000518538 ZNF569Q5MCW4 686 aa22.02■■□□□ 1.12
VEGFA-217ENST00000518538 ANKRD20A2Q5SQ80 823 aa22.02■■□□□ 1.12
VEGFA-217ENST00000518538 PRAMEF14Q5SWL7 426 aa22.02■■□□□ 1.12
VEGFA-217ENST00000518538 ANKRD20A1Q5TYW2 823 aa22.02■■□□□ 1.12
VEGFA-217ENST00000518538 ANKRD20A3Q5VUR7 823 aa22.02■■□□□ 1.12
VEGFA-217ENST00000518538 LRRC66Q68CR7 880 aa22.02■■□□□ 1.12
VEGFA-217ENST00000518538 KDELC1Q6UW63 502 aa22.02■■□□□ 1.12
VEGFA-217ENST00000518538 KDELC2Q7Z4H8 507 aa22.02■■□□□ 1.12
VEGFA-217ENST00000518538 TMEM131Q92545 1883 aa22.02■■□□□ 1.12
VEGFA-217ENST00000518538 ENC1O14682 589 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 KIF5CO60282 957 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 PCDHGA12O60330 932 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 NDST3O95803 873 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 MSNP26038 577 aaKnown RBP22.01■■□□□ 1.11
VEGFA-217ENST00000518538 RXRGP48443 463 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 WNT3AP56704 352 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 MPP3Q13368 585 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 MTM1Q13496 603 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 PDE1CQ14123 709 aaPredicted RBP22.01■■□□□ 1.11
VEGFA-217ENST00000518538 SHBQ15464 509 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 DENND2CQ68D51 928 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 KDM7AQ6ZMT4 941 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 HSD11B1LQ7Z5J1 315 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 ATG4AQ8WYN0 398 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 NUS1Q96E22 293 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 DTD2Q96FN9 168 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 OXNAD1Q96HP4 312 aaPredicted RBP22.01■■□□□ 1.11
VEGFA-217ENST00000518538 PYCARDQ9ULZ3 195 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 CEP250Q9BV73 2442 aa22.01■■□□□ 1.11
VEGFA-217ENST00000518538 A0A0U1RQS6 177 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 SPTY2D1-AS1A0A0U1RR47 76 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 DCDC2BA2VCK2 349 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 C5orf60A6NFR6 353 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 F5H423 210 aaPredicted RBP22■■□□□ 1.11
VEGFA-217ENST00000518538 LIASO43766 372 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 EPOP01588 193 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 PCCBP05166 539 aa22■■□□□ 1.11
VEGFA-217ENST00000518538 IL9RQ01113 521 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms