RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 DNMT3BQ9UBC3 853 aaKnown RBP26.61■■□□□ 1.85
COL13A1-210ENST00000517713 MKI67P46013 3256 aaKnown RBP26.6■■□□□ 1.85
COL13A1-210ENST00000517713 NRG2O14511 850 aaPredicted RBP26.6■■□□□ 1.85
COL13A1-210ENST00000517713 CCDC166P0CW27 439 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 ESRRAP11474 423 aaPredicted RBP26.6■■□□□ 1.85
COL13A1-210ENST00000517713 NAGLUP54802 743 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 ERVFC1P60507 584 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 ASPHQ12797 758 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 TRAF2Q12933 501 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 RIPK1Q13546 671 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 SNCBQ16143 134 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 OR4K2Q8NGD2 314 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 BADQ92934 168 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 ILKAPQ9H0C8 392 aaPredicted RBP26.6■■□□□ 1.85
COL13A1-210ENST00000517713 CORO1CQ9ULV4 474 aaPredicted RBP26.6■■□□□ 1.85
COL13A1-210ENST00000517713 FCF1Q9Y324 198 aaKnown RBP26.6■■□□□ 1.85
COL13A1-210ENST00000517713 ANKRD66B4E2M5 251 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 ATP6V1G2O95670 118 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 HSPA8P11142 646 aaKnown RBP26.6■■□□□ 1.85
COL13A1-210ENST00000517713 USP4Q13107 963 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 RCN2Q14257 317 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 KLC3Q6P597 504 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 PDCD6IPQ8WUM4 868 aaKnown RBP26.6■■□□□ 1.85
COL13A1-210ENST00000517713 MOCOSQ96EN8 888 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 UBXN10Q96LJ8 280 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 ASAH2Q9NR71 780 aa26.6■■□□□ 1.85
COL13A1-210ENST00000517713 CCL16O15467 120 aa26.59■■□□□ 1.85
COL13A1-210ENST00000517713 CSPG5O95196 566 aa26.59■■□□□ 1.85
COL13A1-210ENST00000517713 GLUD1P00367 558 aa26.59■■□□□ 1.85
COL13A1-210ENST00000517713 FPGSQ05932 587 aa26.59■■□□□ 1.85
COL13A1-210ENST00000517713 MPPE1Q53F39 396 aa26.59■■□□□ 1.85
COL13A1-210ENST00000517713 TECRLQ5HYJ1 363 aa26.59■■□□□ 1.85
COL13A1-210ENST00000517713 LONP2Q86WA8 852 aa26.59■■□□□ 1.85
COL13A1-210ENST00000517713 APCDD1Q8J025 514 aa26.59■■□□□ 1.85
COL13A1-210ENST00000517713 SLC22A17Q8WUG5 538 aa26.59■■□□□ 1.85
COL13A1-210ENST00000517713 SMIM14Q96QK8 99 aa26.59■■□□□ 1.85
COL13A1-210ENST00000517713 CCDC106Q9BWC9 280 aa26.59■■□□□ 1.85
COL13A1-210ENST00000517713 ACSS2Q9NR19 701 aa26.59■■□□□ 1.85
COL13A1-210ENST00000517713 IRAK3Q9Y616 596 aa26.59■■□□□ 1.85
COL13A1-210ENST00000517713 PSMA3P25788 255 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 PMLP29590 882 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 SLC8A1P32418 973 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 ZNF549Q6P9A3 640 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 TREML1Q86YW5 311 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 C2orf49Q9BVC5 232 aaPredicted RBP26.58■■□□□ 1.85
COL13A1-210ENST00000517713 SLC46A2Q9BY10 475 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 TLE6Q9H808 572 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 PRKAG2Q9UGJ0 569 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 BAIAP2L1Q9UHR4 511 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 SORCS3Q9UPU3 1222 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 RAP2CQ9Y3L5 183 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 LEFTY2O00292 366 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 WISP3O95389 354 aaPredicted RBP26.58■■□□□ 1.85
COL13A1-210ENST00000517713 MT-CO1P00395 513 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 CHRNGP07510 517 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 HOXB8P17481 243 aaPredicted RBP26.58■■□□□ 1.85
COL13A1-210ENST00000517713 LPOP22079 712 aaPredicted RBP26.58■■□□□ 1.85
COL13A1-210ENST00000517713 STC1P52823 247 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 TBCCQ15814 346 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 TYSND1Q2T9J0 566 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 RALGPS1Q5JS13 557 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 CFAP157Q5JU67 520 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 MPP7Q5T2T1 576 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 AFTPHQ6ULP2 937 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 TPGS1Q6ZTW0 290 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 SPNS2Q8IVW8 549 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 ANKRD49Q8WVL7 239 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 SGF29Q96ES7 293 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 RAD9AQ99638 391 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 BTBD10Q9BSF8 475 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 COG4Q9H9E3 785 aa26.58■■□□□ 1.85
COL13A1-210ENST00000517713 ANKRD36A6QL64 1941 aa26.57■■□□□ 1.84
COL13A1-210ENST00000517713 HIDE1A8MVS5 230 aa26.57■■□□□ 1.84
COL13A1-210ENST00000517713 SLC4A1P02730 911 aa26.57■■□□□ 1.84
COL13A1-210ENST00000517713 RBP1P09455 135 aa26.57■■□□□ 1.84
COL13A1-210ENST00000517713 PFKLP17858 780 aa26.57■■□□□ 1.84
COL13A1-210ENST00000517713 FDXRP22570 491 aa26.57■■□□□ 1.84
COL13A1-210ENST00000517713 ATP5F1P24539 256 aaPredicted RBP26.57■■□□□ 1.84
COL13A1-210ENST00000517713 SLC26A3P40879 764 aa26.57■■□□□ 1.84
COL13A1-210ENST00000517713 ABL2P42684 1182 aa26.57■■□□□ 1.84
COL13A1-210ENST00000517713 ACAP2Q15057 778 aa26.57■■□□□ 1.84
COL13A1-210ENST00000517713 ARL13AQ5H913 290 aaPredicted RBP26.57■■□□□ 1.84
COL13A1-210ENST00000517713 PPM1LQ5SGD2 360 aa26.57■■□□□ 1.84
COL13A1-210ENST00000517713 ATXN7L2Q5T6C5 722 aaPredicted RBP26.57■■□□□ 1.84
COL13A1-210ENST00000517713 VWA5B1Q5TIE3 1220 aa26.57■■□□□ 1.84
COL13A1-210ENST00000517713 PLPP4Q5VZY2 271 aa26.57■■□□□ 1.84
COL13A1-210ENST00000517713 RETSATQ6NUM9 610 aa26.57■■□□□ 1.84
COL13A1-210ENST00000517713 INTS10Q9NVR2 710 aaKnown RBP26.57■■□□□ 1.84
COL13A1-210ENST00000517713 PLK2Q9NYY3 685 aa26.57■■□□□ 1.84
COL13A1-210ENST00000517713 A8MUI8 341 aa26.56■■□□□ 1.84
COL13A1-210ENST00000517713 DIAPH2O60879 1101 aa26.56■■□□□ 1.84
COL13A1-210ENST00000517713 TMEM240Q5SV17 173 aa26.56■■□□□ 1.84
COL13A1-210ENST00000517713 TMEM207Q6UWW9 146 aa26.56■■□□□ 1.84
COL13A1-210ENST00000517713 MRPL43Q8N983 215 aaKnown RBP26.56■■□□□ 1.84
COL13A1-210ENST00000517713 TXNDC5Q8NBS9 432 aaKnown RBP26.56■■□□□ 1.84
COL13A1-210ENST00000517713 SP7Q8TDD2 431 aaPredicted RBP26.56■■□□□ 1.84
COL13A1-210ENST00000517713 LZTS1Q9Y250 596 aa26.56■■□□□ 1.84
COL13A1-210ENST00000517713 KIAA0100Q14667 2235 aaKnown RBP26.56■■□□□ 1.84
COL13A1-210ENST00000517713 K7ERQ8 282 aa26.56■■□□□ 1.84
COL13A1-210ENST00000517713 PIGNO95427 931 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms