RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 PTPROQ16827 1216 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 UGT8Q16880 541 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 MUM1Q2TAK8 710 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 HLA-BQ31612 363 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 MOGAT2Q3SYC2 334 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 SYTL3Q4VX76 610 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 CT83Q5H943 113 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 KCNT1Q5JUK3 1230 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 WLSQ5T9L3 541 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ALS2CLQ60I27 953 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 FAAH2Q6GMR7 532 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TRNP1Q6NT89 227 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 CCDC129Q6ZRS4 1044 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ABHD12BQ7Z5M8 362 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 SYVN1Q86TM6 617 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 CTAGE4Q8IX94 777 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TMEM57Q8N5G2 664 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 KLHDC1Q8N7A1 406 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 RTL3Q8N8U3 475 aaKnown RBP-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TMEM116Q8NCL8 245 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 CHPT1Q8WUD6 406 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 SLCO2A1Q92959 643 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 EAF2Q96CJ1 260 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 HDAC11Q96DB2 347 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 MAGED4Q96JG8 741 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 MRGPRX4Q96LA9 322 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 LRFN5Q96NI6 719 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 IPO9Q96P70 1041 aaKnown RBP-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 SPAG8Q99932 426 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 MAPKAP1Q9BPZ7 522 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 POLR3CQ9BUI4 534 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 SHARPINQ9H0F6 387 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 P2RY12Q9H244 342 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 VCXQ9H320 206 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 MS4A5Q9H3V2 200 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TUBB1Q9H4B7 451 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 NOX4Q9NPH5 578 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ZNF331Q9NQX6 463 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 PLSCR3Q9NRY6 295 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TDP1Q9NUW8 608 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 RNF186Q9NXI6 227 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 VNN3Q9NY84 501 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 H2AFY2Q9P0M6 372 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 CALCOCO1Q9P1Z2 691 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TRPC5Q9UL62 973 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 RAB23Q9ULC3 237 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 USTQ9Y2C2 406 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 PAM16Q9Y3D7 125 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 RAP2CQ9Y3L5 183 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 HERC2O95714 4834 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 COL1A1P02452 1464 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ZFYVE26Q68DK2 2539 aa-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 COL27A1Q8IZC6 1860 aaPredicted RBP-0.75□□□□□ -2.53
RNU6-1238P-201ENST00000517215 SEC16AO15027 2179 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TNCP24821 2201 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 DOPEY1Q5JWR5 2465 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 UBR5O95071 2799 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 IGKV1-8A0A0C4DH67 115 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 A0A1B0GW55 424 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 A0A1W2PPK0 400 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 MTMR11A4FU01 709 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 VWA3AA6NCI4 1184 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 USP27XA6NNY8 438 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 MPTX1A8MV57 137 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 A8MV72 311 aaPredicted RBP-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 A8MXK9 166 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 C16orf90A8MZG2 172 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 NT5C1B-RDH14C9J2C7 533 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TNPO2O14787 897 aaKnown RBP-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 SMAD7O15105 426 aaKnown RBP-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 SLC22A2O15244 555 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 KCNQ2O43526 872 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 SGTAO43765 313 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ADCY3O60266 1144 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TRMUO75648 421 aaKnown RBP-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 IPO7O95373 1038 aaKnown RBP-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 CLDN1O95832 211 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 C6orf47O95873 294 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ACTL6AO96019 429 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 P0C880 135 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 DUX4L2P0CJ85 424 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 DUX4L3P0CJ86 424 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 DUX4L5P0CJ88 424 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 DUX4L6P0CJ89 424 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 DUX4L7P0CJ90 424 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 RNH1P13489 461 aaKnown RBP-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 GYS1P13807 737 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 MTHFD2P13995 350 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 CD1EP15812 388 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 EGR1P18146 543 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 ACHEP22303 614 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 GPX3P22352 226 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 WARSP23381 471 aaKnown RBP-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 CHRNA5P30532 468 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 UQCRC1P31930 480 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 SLC8A1P32418 973 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 HSPA4P34932 840 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 NUDT1P36639 197 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 OPRD1P41143 372 aa-0.76□□□□□ -2.53
RNU6-1238P-201ENST00000517215 TMPOP42166 694 aaKnown RBP-0.76□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms