RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 RCCD1A6NED2 376 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 GOLGA8CPA6NN73 597 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 PDE2AO00408 941 aaPredicted RBP11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 TRIM38O00635 465 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 TPP1O14773 563 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 MTSS1O43312 755 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 SIGLEC6O43699 453 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 HEXIM1O94992 359 aaKnown RBP11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 TOP3BO95985 862 aaKnown RBP11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 HLA-DQB2P05538 268 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 PDHA1P08559 390 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 HOXC4P09017 264 aaPredicted RBP11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 TGM2P21980 687 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 KELP23276 732 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 TRIM23P36406 574 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 CETN2P41208 172 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 EPHB1P54762 984 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 GSDMDP57764 484 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 DSC2Q02487 901 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 PPARDQ03181 441 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 EIF2B5Q13144 721 aaKnown RBP11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 ARHGEF7Q14155 803 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 FAXCQ5TGI0 409 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 KAZNQ674X7 775 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 CCDC50Q8IVM0 306 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 GALNT15Q8N3T1 639 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 SDR16C5Q8N3Y7 309 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 CNTD1Q8N815 330 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 ZNF548Q8NEK5 533 aaPredicted RBP11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 LRRN4Q8WUT4 740 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 TBATAQ96M53 351 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 COQ10AQ96MF6 247 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 CNTNAP3BQ96NU0 1288 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 ADGRE3Q9BY15 652 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 CNTNAP3Q9BZ76 1288 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 EVA1BQ9NVM1 165 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 NLGN3Q9NZ94 848 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 NCKIPSDQ9NZQ3 722 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 SPASTQ9UBP0 616 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 KLF15Q9UIH9 416 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 EFR3BQ9Y2G0 817 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 ANKRD36A6QL64 1941 aa11.23□□□□□ -0.61
SCARNA16.1-201ENST00000516133 ANKRD11Q6UB99 2663 aaPredicted RBP11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 FRYQ5TBA9 3013 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 A0A0J9YYE9 177 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 CCDC66A2RUB6 948 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 K7ESM1 405 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 CACNB4O00305 520 aaPredicted RBP11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 FFAR2O15552 330 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 AQP9O43315 295 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 TRBC1P01850 177 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 PCCBP05166 539 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 SPINK2P20155 84 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 COL5A1P20908 1838 aaPredicted RBP11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 CTNNA1P35221 906 aaKnown RBP11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 HNF1BP35680 557 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 NIPAL4Q0D2K0 466 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 TP53BP1Q12888 1972 aaPredicted RBP11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 NFATC4Q14934 902 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 CNGA3Q16281 694 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 PPP2R5EQ16537 467 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 PROX2Q3B8N5 592 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 TEX44Q53QW1 395 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 CCDC157Q569K6 752 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 TPRG1LQ5T0D9 272 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 PNCKQ6P2M8 343 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 ENPP7Q6UWV6 458 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 NPNTQ6UXI9 565 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 KDM7AQ6ZMT4 941 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 TMPRSS7Q7RTY8 843 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 NT5DC3Q86UY8 548 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 NLRP8Q86W28 1048 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 TMEM139Q8IV31 216 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 RAVER1Q8IY67 606 aaKnown RBP11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 PHACTR4Q8IZ21 702 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 SYCE1Q8N0S2 351 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 FAM181AQ8N9Y4 354 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 ACRBPQ8NEB7 543 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 LMX1AQ8TE12 382 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 TFB1MQ8WVM0 346 aaKnown RBP11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 KRT35Q92764 455 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 AGAP3Q96P47 875 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 TDRD1Q9BXT4 1180 aaKnown RBP11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 SLC25A51Q9H1U9 297 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 USP29Q9HBJ7 922 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 PCDH9Q9HC56 1237 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 APOBEC3BQ9UH17 382 aaKnown RBP11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 CHKBQ9Y259 395 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 OR1A2Q9Y585 309 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 SPEGQ15772 3267 aa11.22□□□□□ -0.61
SCARNA16.1-201ENST00000516133 CACNA1BQ00975 2339 aa11.21□□□□□ -0.61
SCARNA16.1-201ENST00000516133 hCG_1818297A0A087WSY0 165 aa11.21□□□□□ -0.61
SCARNA16.1-201ENST00000516133 NPIPB15A6NHN6 443 aaPredicted RBP11.21□□□□□ -0.61
SCARNA16.1-201ENST00000516133 ANKRD66B4E2M5 251 aa11.21□□□□□ -0.61
SCARNA16.1-201ENST00000516133 LMO7DNF2Z398 122 aa11.21□□□□□ -0.61
SCARNA16.1-201ENST00000516133 TNFRSF10CO14798 259 aa11.21□□□□□ -0.61
SCARNA16.1-201ENST00000516133 RFPL3O75679 317 aa11.21□□□□□ -0.61
SCARNA16.1-201ENST00000516133 RASGRP1O95267 797 aa11.21□□□□□ -0.61
SCARNA16.1-201ENST00000516133 PRLP01236 227 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms