RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 CHGBP05060 677 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CFIP05156 583 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ICAM1P05362 532 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LCKP06239 509 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 C2P06681 752 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CTSBP07858 339 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SERPINF2P08697 491 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SNRPCP09234 159 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SBK3P0C264 359 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DCAF8L2P0C7V8 631 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CECR9P0C854 216 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FAM157BP0CG42 384 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZNF888P0CJ79 500 aaPredicted RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 UROSP10746 265 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CHRNB1P11230 501 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 UNGP13051 313 aaPredicted RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZNF35P13682 527 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DARSP14868 501 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FOLR1P15328 257 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GNB3P16520 340 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ALOX12P18054 663 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 IGFBP2P18065 325 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ADRA2BP18089 450 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LIG1P18858 919 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TYMPP19971 482 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PGCP20142 388 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 AGXTP21549 392 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ACHEP22303 614 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DGKAP23743 735 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CHMLP26374 656 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HSD3B2P26439 372 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GIFP27352 417 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 IL1R2P27930 398 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RBMS1P29558 406 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PMLP29590 882 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 INPP5BP32019 993 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 IL13P35225 146 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HOXD12P35452 270 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HMGCLP35914 325 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RPL4P36578 427 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GNL1P36915 607 aaPredicted RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RPS19P39019 145 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CCR2P41597 374 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MAGEA12P43365 314 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PTPN9P43378 593 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CRKLP46109 303 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CPA2P48052 419 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SLC6A9P48067 706 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ALDH3B2P48448 385 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 RBM25P49756 843 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CPT1AP50416 773 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ASCL1P50553 236 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ATP1A2P50993 1020 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DNA2P51530 1060 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HDGFP51858 240 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZNF140P52738 457 aaPredicted RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LIMK1P53667 647 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 MAPK10P53779 464 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NR1H2P55055 460 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CASP9P55211 416 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ITGA1P56199 1179 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 STX17P56962 302 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 KLF3P57682 345 aaPredicted RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DCDC1P59894 354 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SEC61A1P61619 476 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 UFM1P61960 85 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GNB2P62879 340 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ASIC1P78348 528 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 POU6F2P78424 691 aaPredicted RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SLC7A9P82251 487 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 GUCY1B3Q02153 619 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TNFAIP2Q03169 654 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZNF85Q03923 595 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LIPEQ05469 1076 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZNF91Q05481 1191 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FOXM1Q08050 763 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PCDH1Q08174 1060 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 CRYZQ08257 329 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SPEM2Q0P670 501 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 OVGP1Q12889 678 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZNF155Q12901 538 aaPredicted RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ELAVL2Q12926 359 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 TRAF2Q12933 501 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ITGADQ13349 1161 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ZNF177Q13360 481 aaPredicted RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SQSTM1Q13501 440 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ITGA7Q13683 1181 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 FAM53BQ14153 422 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ARHGEF7Q14155 803 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SPIDRQ14159 915 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 WFDC2Q14508 124 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 IHHQ14623 411 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 NOLC1Q14978 699 aaKnown RBP eCLIP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SLC39A14Q15043 492 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 PTPRRQ15256 657 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 SMAD1Q15797 465 aaKnown RBP-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 HLFQ16534 295 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 LONRF1Q17RB8 773 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 DEFB135Q30KP9 77 aa-0.73□□□□□ -2.53
SCARNA20.2-201ENST00000516052 ANXA2RQ3ZCQ2 193 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms