RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	DUS2	Q9NX74	493 aa	Known RBP	11.99	□□□□□ -0.49
LMNA-224	ENST00000515711	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	11.99	□□□□□ -0.49
LMNA-224	ENST00000515711	TLK1	Q9UKI8	766 aa		11.99	□□□□□ -0.49
LMNA-224	ENST00000515711	INTS6	Q9UL03	887 aa	Known RBP	11.99	□□□□□ -0.49
LMNA-224	ENST00000515711	SLC8A2	Q9UPR5	921 aa		11.99	□□□□□ -0.49
LMNA-224	ENST00000515711	VPS9D1	Q9Y2B5	631 aa		11.99	□□□□□ -0.49
LMNA-224	ENST00000515711	STARD13	Q9Y3M8	1113 aa		11.99	□□□□□ -0.49
LMNA-224	ENST00000515711		A0A096LPK6	155 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	FAM95C	A0A1B0GW59	222 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	GOLGA8T	H3BQL2	631 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	HTRA2	O43464	458 aa	Predicted RBP	11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	SNX3	O60493	162 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	EDF1	O60869	148 aa	Known RBP	11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	AHSG	P02765	367 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	ADH5	P11766	374 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	SRC	P12931	536 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	STMN1	P16949	149 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	POU3F3	P20264	500 aa	Predicted RBP	11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	FOXN2	P32314	431 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	NNMT	P40261	264 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	NUMB	P49757	651 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	CSRP3	P50461	194 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	RAB10	P61026	200 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	MPP1	Q00013	466 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	ECT2L	Q008S8	904 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	USP10	Q14694	798 aa	Known RBP	11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	SMAD1	Q15797	465 aa	Known RBP	11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	QPCT	Q16769	361 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	TSNAXIP1	Q2TAA8	658 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	AARS2	Q5JTZ9	985 aa	Known RBP	11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	RNF187	Q5TA31	235 aa	Predicted RBP	11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	FAM45BP	Q6NSW5	357 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	TMC5	Q6UXY8	1006 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	SPATA21	Q7Z572	469 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	PIGW	Q7Z7B1	504 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	GPR149	Q86SP6	731 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	RNF135	Q8IUD6	432 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	DENND6A	Q8IWF6	608 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	NPAS3	Q8IXF0	933 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	CCDC63	Q8NA47	563 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	PRSS33	Q8NF86	280 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	OR6P1	Q8NGX9	317 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	RDH11	Q8TC12	318 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	FAM45A	Q8TCE6	357 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	BPIFB1	Q8TDL5	484 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	ZNF75CP	Q92670	426 aa	Predicted RBP	11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	ATXN7L3B	Q96GX2	97 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	SEC16B	Q96JE7	1060 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	DNAJC1	Q96KC8	554 aa	Known RBP	11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	ZSWIM3	Q96MP5	696 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	TCF12	Q99081	682 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	TM6SF2	Q9BZW4	377 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	MANSC1	Q9H8J5	431 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	TRPV4	Q9HBA0	871 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	MAGEE1	Q9HCI5	957 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	CATSPERZ	Q9NTU4	200 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	SLC39A10	Q9ULF5	831 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	CLEC4E	Q9ULY5	219 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	MTO1	Q9Y2Z2	717 aa	Known RBP	11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	USP15	Q9Y4E8	981 aa	Predicted RBP	11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	PCDHGC4	Q9Y5F7	938 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	ARL5A	Q9Y689	179 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	WNT6	Q9Y6F9	365 aa		11.98	□□□□□ -0.49
LMNA-224	ENST00000515711	MUC22	E2RYF6	1773 aa	Predicted RBP	11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	COL4A3	Q01955	1670 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711		H7C0S8	307 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	PLIN3	O60664	434 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	H2AFY	O75367	372 aa	Known RBP	11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	MT-CO1	P00395	513 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	GOT2	P00505	430 aa	Known RBP	11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	CYP17A1	P05093	508 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	BPGM	P07738	259 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	PDHA1	P08559	390 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	TROVE2	P10155	538 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	POLR2E	P19388	210 aa	Known RBP	11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	NFKBIA	P25963	317 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	CTBP1	Q13363	440 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	PDGFRL	Q15198	375 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	DHCR24	Q15392	516 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	TYSND1	Q2T9J0	566 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	FASTKD1	Q53R41	847 aa	Known RBP	11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	RARS2	Q5T160	578 aa	Known RBP	11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	CDHR3	Q6ZTQ4	885 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	RAPH1	Q70E73	1250 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	CMC1	Q7Z7K0	106 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	CLEC14A	Q86T13	490 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	ADGRG2	Q8IZP9	1017 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	PAF1	Q8N7H5	531 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	EFHB	Q8N7U6	833 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	ARMC2	Q8NEN0	867 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	OR4L1	Q8NH43	312 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	ZNF398	Q8TD17	642 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	SMARCD2	Q92925	531 aa		11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
LMNA-224	ENST00000515711	ELMO2	Q96JJ3	720 aa		11.97	□□□□□ -0.49

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