RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 BORAQ6PGQ7 559 aa15.81■□□□□ 0.12
LMNA-223ENST00000515459 WDR59Q6PJI9 974 aa15.81■□□□□ 0.12
LMNA-223ENST00000515459 LIPIQ6XZB0 460 aa15.81■□□□□ 0.12
LMNA-223ENST00000515459 TRIM72Q6ZMU5 477 aa15.81■□□□□ 0.12
LMNA-223ENST00000515459 SELENOOQ9BVL4 669 aa15.81■□□□□ 0.12
LMNA-223ENST00000515459 LGR4Q9BXB1 951 aa15.81■□□□□ 0.12
LMNA-223ENST00000515459 ATP13A3Q9H7F0 1226 aa15.81■□□□□ 0.12
LMNA-223ENST00000515459 PDFQ9HBH1 243 aa15.81■□□□□ 0.12
LMNA-223ENST00000515459 PRSS38A1L453 326 aa15.8■□□□□ 0.12
LMNA-223ENST00000515459 RHPN2P1A8MT19 583 aa15.8■□□□□ 0.12
LMNA-223ENST00000515459 PDE2AO00408 941 aaPredicted RBP15.8■□□□□ 0.12
LMNA-223ENST00000515459 FGF10O15520 208 aaPredicted RBP15.8■□□□□ 0.12
LMNA-223ENST00000515459 NSFP46459 744 aaKnown RBP15.8■□□□□ 0.12
LMNA-223ENST00000515459 CSNK1DP48730 415 aa15.8■□□□□ 0.12
LMNA-223ENST00000515459 AIF1P55008 147 aa15.8■□□□□ 0.12
LMNA-223ENST00000515459 GSCP56915 257 aaPredicted RBP15.8■□□□□ 0.12
LMNA-223ENST00000515459 OR1D5P58170 312 aa15.8■□□□□ 0.12
LMNA-223ENST00000515459 POLR2LP62875 67 aaKnown RBP15.8■□□□□ 0.12
LMNA-223ENST00000515459 SRLQ86TD4 932 aa15.8■□□□□ 0.12
LMNA-223ENST00000515459 PAF1Q8N7H5 531 aa15.8■□□□□ 0.12
LMNA-223ENST00000515459 RCBTB1Q8NDN9 531 aa15.8■□□□□ 0.12
LMNA-223ENST00000515459 ZNF564Q8TBZ8 553 aaPredicted RBP15.8■□□□□ 0.12
LMNA-223ENST00000515459 NKD1Q969G9 470 aa15.8■□□□□ 0.12
LMNA-223ENST00000515459 TAAR9Q96RI9 348 aa15.8■□□□□ 0.12
LMNA-223ENST00000515459 WDR26Q9H7D7 661 aa15.8■□□□□ 0.12
LMNA-223ENST00000515459 SPATS2LQ9NUQ6 558 aaKnown RBP15.8■□□□□ 0.12
LMNA-223ENST00000515459 DONSONQ9NYP3 566 aa15.8■□□□□ 0.12
LMNA-223ENST00000515459 FZD10Q9ULW2 581 aa15.8■□□□□ 0.12
LMNA-223ENST00000515459 DOPEY2Q9Y3R5 2298 aa15.8■□□□□ 0.12
LMNA-223ENST00000515459 ZFC3H1O60293 1989 aaKnown RBP15.79■□□□□ 0.12
LMNA-223ENST00000515459 IGHV5-10-1A0A0J9YXX1 117 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 J3KR12 359 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 TEX33O43247 280 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 PRAMEF11O60813 436 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 UNGP13051 313 aaPredicted RBP15.79■□□□□ 0.12
LMNA-223ENST00000515459 CCNB1P14635 433 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 MAZP56270 477 aaKnown RBP15.79■□□□□ 0.12
LMNA-223ENST00000515459 PTP4A2Q12974 167 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 NR1D2Q14995 579 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 AFMIDQ63HM1 303 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 PNCKQ6P2M8 343 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 ZNF438Q7Z4V0 828 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 C17orf82Q86X59 251 aaPredicted RBP15.79■□□□□ 0.12
LMNA-223ENST00000515459 PTRH1Q86Y79 214 aaKnown RBP15.79■□□□□ 0.12
LMNA-223ENST00000515459 IL22RA1Q8N6P7 574 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 C3orf20Q8ND61 904 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 GPBAR1Q8TDU6 330 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 ZDHHC1Q8WTX9 485 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 ECHDC3Q96DC8 303 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 NUDT22Q9BRQ3 303 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 GSDMCQ9BYG8 508 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 LRRC19Q9H756 370 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 ADAM22Q9P0K1 906 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 ANKMY1Q9P2S6 941 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 PCDHGA3Q9Y5H0 932 aa15.79■□□□□ 0.12
LMNA-223ENST00000515459 ANKRD62A6NC57 917 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 SIGLEC16A6NMB1 481 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 CCP110O43303 1012 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 PALMO75781 387 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 FGF1P05230 155 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 CALB1P05937 261 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 FGF3P11487 239 aaPredicted RBP15.78■□□□□ 0.12
LMNA-223ENST00000515459 MYCLP1P12525 358 aaPredicted RBP15.78■□□□□ 0.12
LMNA-223ENST00000515459 GM2AP17900 193 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 SOX5P35711 763 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 RGRP47804 291 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 ARSDP51689 593 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 ZNF143P52747 638 aaPredicted RBP15.78■□□□□ 0.12
LMNA-223ENST00000515459 NDST2P52849 883 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 POLE2P56282 527 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 TPI1P60174 286 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 BCL2L1Q07817 233 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 ILF3Q12906 894 aaKnown RBP eCLIP15.78■□□□□ 0.12
LMNA-223ENST00000515459 KCNAB2Q13303 367 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 BIRC2Q13490 618 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 TRA2AQ13595 282 aaKnown RBP eCLIP15.78■□□□□ 0.12
LMNA-223ENST00000515459 ACOX1Q15067 660 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 DPPA4Q7L190 304 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 TSEN2Q8NCE0 465 aaKnown RBP15.78■□□□□ 0.12
LMNA-223ENST00000515459 CCDC112Q8NEF3 446 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 CCDC74BQ96LY2 380 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 CDH19Q9H159 772 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 GANQ9H2C0 597 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 CARS2Q9HA77 564 aaKnown RBP15.78■□□□□ 0.12
LMNA-223ENST00000515459 TUBD1Q9UJT1 453 aa15.78■□□□□ 0.12
LMNA-223ENST00000515459 ARHGAP42A6NI28 874 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 A8MX80 341 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 ECEL1O95672 775 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 NTRK1P04629 796 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 LIFP15018 202 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 ERCC5P28715 1186 aaPredicted RBP15.77■□□□□ 0.12
LMNA-223ENST00000515459 CD1CP29017 333 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 HTR7P34969 479 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 UGT1A3P35503 534 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 GPR3P46089 330 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 CCR10P46092 362 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 LIMK2P53671 638 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 UBAP2LQ14157 1087 aaKnown RBP15.77■□□□□ 0.12
LMNA-223ENST00000515459 NRROSQ86YC3 692 aa15.77■□□□□ 0.12
LMNA-223ENST00000515459 PHF13Q86YI8 300 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms