RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 HIF1AQ16665 826 aa21.03■□□□□ 0.96
LSM6-207ENST00000515311 CDKN3Q16667 212 aa21.03■□□□□ 0.96
LSM6-207ENST00000515311 CRTC1Q6UUV9 634 aa21.03■□□□□ 0.96
LSM6-207ENST00000515311 PDIK1LQ8N165 341 aa21.03■□□□□ 0.96
LSM6-207ENST00000515311 OR2T34Q8NGX1 318 aa21.03■□□□□ 0.96
LSM6-207ENST00000515311 FBXO25Q8TCJ0 367 aa21.03■□□□□ 0.96
LSM6-207ENST00000515311 BRSK1Q8TDC3 778 aa21.03■□□□□ 0.96
LSM6-207ENST00000515311 BLOC1S5Q8TDH9 187 aa21.03■□□□□ 0.96
LSM6-207ENST00000515311 NELL1Q92832 810 aa21.03■□□□□ 0.96
LSM6-207ENST00000515311 TOE1Q96GM8 510 aaKnown RBP21.03■□□□□ 0.96
LSM6-207ENST00000515311 FOXP3Q9BZS1 431 aa21.03■□□□□ 0.96
LSM6-207ENST00000515311 PIH1D1Q9NWS0 290 aaKnown RBP21.03■□□□□ 0.96
LSM6-207ENST00000515311 WSB2Q9NYS7 404 aaPredicted RBP21.03■□□□□ 0.96
LSM6-207ENST00000515311 BFARQ9NZS9 450 aa21.03■□□□□ 0.96
LSM6-207ENST00000515311 GGT7Q9UJ14 662 aa21.03■□□□□ 0.96
LSM6-207ENST00000515311 LRRK1Q38SD2 2015 aa21.03■□□□□ 0.96
LSM6-207ENST00000515311 NUMA1Q14980 2115 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 C1orf232A0A0U1RR37 186 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 PSMD11O00231 422 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 SEMA4FO95754 770 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 TPH1P17752 444 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 ACSL1P33121 698 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 FNTBP49356 437 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 ARL4CP56559 192 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 SESN2P58004 480 aaPredicted RBP21.02■□□□□ 0.96
LSM6-207ENST00000515311 LAMB3Q13751 1172 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 ARHGEF7Q14155 803 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 TAF1AQ15573 450 aaPredicted RBP21.02■□□□□ 0.96
LSM6-207ENST00000515311 CERCAMQ5T4B2 595 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 LRRC66Q68CR7 880 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 KIAA1161Q6NSJ0 714 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 GLT6D1Q7Z4J2 308 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 TSPAN33Q86UF1 283 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 RAVER1Q8IY67 606 aaKnown RBP21.02■□□□□ 0.96
LSM6-207ENST00000515311 EIF1ADQ8N9N8 165 aaKnown RBP21.02■□□□□ 0.96
LSM6-207ENST00000515311 RANBP9Q96S59 729 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 PHACTR1Q9C0D0 580 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 PCED1AQ9H1Q7 454 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 ANKZF1Q9H8Y5 726 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 ZFYVE1Q9HBF4 777 aa21.02■□□□□ 0.96
LSM6-207ENST00000515311 C10orf142B7Z368 130 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 GALR2O43603 387 aaPredicted RBP21.01■□□□□ 0.95
LSM6-207ENST00000515311 AVILO75366 819 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 PCDH8O95206 1070 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 CRTAMO95727 393 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 ELFN1P0C7U0 828 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 LIG3P49916 1009 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 RPS21P63220 83 aaKnown RBP21.01■□□□□ 0.95
LSM6-207ENST00000515311 PDE1BQ01064 536 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 SEMG2Q02383 582 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 POU6F1Q14863 301 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 ANGPT1Q15389 498 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 CNGA3Q16281 694 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 DNAJC21Q5F1R6 531 aaKnown RBP21.01■□□□□ 0.95
LSM6-207ENST00000515311 LIPIQ6XZB0 460 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 SLC36A4Q6YBV0 504 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 LYSMD3Q7Z3D4 306 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 TTC30BQ8N4P2 665 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 CXorf40AQ8TE69 158 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 PTCD2Q8WV60 388 aaKnown RBP21.01■□□□□ 0.95
LSM6-207ENST00000515311 RLN3Q8WXF3 142 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 IFT81Q8WYA0 676 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 C19orf43Q9BQ61 176 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 GPR63Q9BZJ6 419 aa21.01■□□□□ 0.95
LSM6-207ENST00000515311 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.01■□□□□ 0.95
LSM6-207ENST00000515311 ZNF106Q9H2Y7 1883 aaKnown RBP21.01■□□□□ 0.95
LSM6-207ENST00000515311 TBC1D3DA0A087WVF3 549 aa21■□□□□ 0.95
LSM6-207ENST00000515311 TBC1D3IA0A087WXS9 549 aa21■□□□□ 0.95
LSM6-207ENST00000515311 TBC1D3EA0A087X179 549 aa21■□□□□ 0.95
LSM6-207ENST00000515311 TBC1D3KA0A087X1G2 549 aa21■□□□□ 0.95
LSM6-207ENST00000515311 HEATR9A2RTY3 570 aa21■□□□□ 0.95
LSM6-207ENST00000515311 TBC1D3FA6NER0 549 aaPredicted RBP21■□□□□ 0.95
LSM6-207ENST00000515311 SDR42E2A6NKP2 422 aa21■□□□□ 0.95
LSM6-207ENST00000515311 C2orf81A6NN90 581 aa21■□□□□ 0.95
LSM6-207ENST00000515311 A8MX80 341 aa21■□□□□ 0.95
LSM6-207ENST00000515311 TBC1D3LB9A6J9 549 aa21■□□□□ 0.95
LSM6-207ENST00000515311 TBC1D3HP0C7X1 549 aa21■□□□□ 0.95
LSM6-207ENST00000515311 ADRA1DP25100 572 aa21■□□□□ 0.95
LSM6-207ENST00000515311 MGAT1P26572 445 aa21■□□□□ 0.95
LSM6-207ENST00000515311 TNFRSF8P28908 595 aa21■□□□□ 0.95
LSM6-207ENST00000515311 HMGCLP35914 325 aa21■□□□□ 0.95
LSM6-207ENST00000515311 CARSP49589 748 aaKnown RBP21■□□□□ 0.95
LSM6-207ENST00000515311 STC1P52823 247 aa21■□□□□ 0.95
LSM6-207ENST00000515311 HLTFQ14527 1009 aaKnown RBP eCLIP21■□□□□ 0.95
LSM6-207ENST00000515311 TMEM259Q4ZIN3 620 aa21■□□□□ 0.95
LSM6-207ENST00000515311 FNBP1LQ5T0N5 605 aa21■□□□□ 0.95
LSM6-207ENST00000515311 TBC1D3GQ6DHY5 549 aa21■□□□□ 0.95
LSM6-207ENST00000515311 TBC1D3CQ6IPX1 549 aa21■□□□□ 0.95
LSM6-207ENST00000515311 TMC3Q7Z5M5 1100 aa21■□□□□ 0.95
LSM6-207ENST00000515311 TRIM69Q86WT6 500 aa21■□□□□ 0.95
LSM6-207ENST00000515311 TBC1D3Q8IZP1 549 aaPredicted RBP21■□□□□ 0.95
LSM6-207ENST00000515311 CBARPQ8N350 705 aaPredicted RBP21■□□□□ 0.95
LSM6-207ENST00000515311 FAM160A2Q8N612 972 aaPredicted RBP21■□□□□ 0.95
LSM6-207ENST00000515311 LRRC39Q96DD0 335 aa21■□□□□ 0.95
LSM6-207ENST00000515311 WRAP53Q9BUR4 548 aaKnown RBP21■□□□□ 0.95
LSM6-207ENST00000515311 MTRF1LQ9UGC7 380 aaKnown RBP21■□□□□ 0.95
LSM6-207ENST00000515311 TRPM6Q9BX84 2022 aa21■□□□□ 0.95
LSM6-207ENST00000515311 MAGEB16A2A368 324 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 MROH6A6NGR9 719 aa20.99■□□□□ 0.95
LSM6-207ENST00000515311 E7ESA3 106 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms