RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 FAM153AQ9UHL3 310 aa14□□□□□ -0.17
USP46-209ENST00000514536 RSPH14Q9UHP6 348 aa14□□□□□ -0.17
USP46-209ENST00000514536 RPL26L1Q9UNX3 145 aaKnown RBP14□□□□□ -0.17
USP46-209ENST00000514536 JRKLQ9Y4A0 524 aa14□□□□□ -0.17
USP46-209ENST00000514536 DOCK9Q9BZ29 2069 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 TRPM6Q9BX84 2022 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 A0A0J9YYE9 177 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 A6NNZ2 444 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 CEP104O60308 925 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 MAGEC1O60732 1142 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 STK10O94804 968 aaKnown RBP13.99□□□□□ -0.17
USP46-209ENST00000514536 HEXIM1O94992 359 aaKnown RBP13.99□□□□□ -0.17
USP46-209ENST00000514536 CER1O95813 267 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 TRBC1P01850 177 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 LHCGRP22888 699 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 CDK18Q07002 472 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 ARHGEF7Q14155 803 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 LRRC14Q15048 493 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 ACOX1Q15067 660 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 CNGA3Q16281 694 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 QPCTQ16769 361 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 ANKRD20A2Q5SQ80 823 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 ANKRD20A1Q5TYW2 823 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 ANKRD20A3Q5VUR7 823 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 CRTC1Q6UUV9 634 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 PTAR1Q7Z6K3 402 aaPredicted RBP13.99□□□□□ -0.17
USP46-209ENST00000514536 SLC35F6Q8N357 371 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 FAM71DQ8N9W8 422 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 DENND6BQ8NEG7 585 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 SLC35B2Q8TB61 432 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 C1orf54Q8WWF1 131 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 ATG4AQ8WYN0 398 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 ADGRE3Q9BY15 652 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 GDF3Q9NR23 364 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 DNAAF2Q9NVR5 837 aaKnown RBP13.99□□□□□ -0.17
USP46-209ENST00000514536 DNPEPQ9ULA0 475 aa13.99□□□□□ -0.17
USP46-209ENST00000514536 FNDC3AQ9Y2H6 1198 aaKnown RBP13.99□□□□□ -0.17
USP46-209ENST00000514536 PLXNA2O75051 1894 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 ANKRD66B4E2M5 251 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 KIF5CO60282 957 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 GM2AP17900 193 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 IGFALSP35858 605 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 WNT3AP56704 352 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 GALNT3Q14435 633 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 AGERQ15109 404 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 IRF4Q15306 451 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 SLC14A2Q15849 920 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 ZNF423Q2M1K9 1284 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 KYAT3Q6YP21 454 aaKnown RBP13.98□□□□□ -0.17
USP46-209ENST00000514536 HSD11B1LQ7Z5J1 315 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 CBARPQ8N350 705 aaPredicted RBP13.98□□□□□ -0.17
USP46-209ENST00000514536 FAM174AQ8TBP5 190 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 CCDC110Q8TBZ0 833 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 IFT43Q96FT9 208 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 OXNAD1Q96HP4 312 aaPredicted RBP13.98□□□□□ -0.17
USP46-209ENST00000514536 COQ10AQ96MF6 247 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 TRIB3Q96RU7 358 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 ELF4Q99607 663 aaPredicted RBP13.98□□□□□ -0.17
USP46-209ENST00000514536 RTKNQ9BST9 563 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 TMEM121Q9BTD3 319 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 MLPHQ9BV36 600 aaPredicted RBP13.98□□□□□ -0.17
USP46-209ENST00000514536 KNL1Q8NG31 2342 aa13.98□□□□□ -0.17
USP46-209ENST00000514536 PCDH15Q96QU1 1955 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 ADAMTS9Q9P2N4 1935 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 DCDC2BA2VCK2 349 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 CAPN8A6NHC0 703 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 TM4SF5O14894 197 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 LIASO43766 372 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 FGGP02679 453 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 PFN3P60673 137 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 PTSQ03393 145 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 SNX1Q13596 522 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 LRRC66Q68CR7 880 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 ITPRIPL1Q6GPH6 555 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 CCDC70Q6NSX1 233 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 KDELC1Q6UW63 502 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 SPATA13Q96N96 652 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 GBA3Q9H227 469 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 TM7SF3Q9NS93 570 aa13.97□□□□□ -0.17
USP46-209ENST00000514536 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.97□□□□□ -0.17
USP46-209ENST00000514536 A0A1B0GTQ1 180 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 C5orf60A6NFR6 353 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 DFNA5O60443 496 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 ZNF189O75820 626 aaPredicted RBP13.96□□□□□ -0.17
USP46-209ENST00000514536 CLDN7O95471 211 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 NDST3O95803 873 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 ATP1A1P05023 1023 aaKnown RBP13.96□□□□□ -0.17
USP46-209ENST00000514536 PCCBP05166 539 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 CD59P13987 128 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 MSNP26038 577 aaKnown RBP13.96□□□□□ -0.17
USP46-209ENST00000514536 PSMB4P28070 264 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 ETV3P41162 512 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 RABIFP47224 123 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 GDF10P55107 478 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 IL9RQ01113 521 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 PDE1CQ14123 709 aaPredicted RBP13.96□□□□□ -0.17
USP46-209ENST00000514536 INPP5AQ14642 412 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 SIX1Q15475 284 aaPredicted RBP13.96□□□□□ -0.17
USP46-209ENST00000514536 LONRF2Q1L5Z9 754 aa13.96□□□□□ -0.17
USP46-209ENST00000514536 RFLNAQ6ZTI6 216 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms