RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 PTCD2Q8WV60 388 aaKnown RBP12.57□□□□□ -0.4
PDPN-210ENST00000513143 EBNA1BP2Q99848 306 aaKnown RBP12.57□□□□□ -0.4
PDPN-210ENST00000513143 OMDQ99983 421 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 WDR83Q9BRX9 315 aaKnown RBP12.57□□□□□ -0.4
PDPN-210ENST00000513143 MRM3Q9HC36 420 aaKnown RBP12.57□□□□□ -0.4
PDPN-210ENST00000513143 SAYSD1Q9NPB0 183 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 ITM2CQ9NQX7 267 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 FBXL12Q9NXK8 326 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 B4GALT6Q9UBX8 382 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 SERGEFQ9UGK8 458 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 FZD4Q9ULV1 537 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 ZNF711Q9Y462 761 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 TCAF1Q9Y4C2 921 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 SCN8AQ9UQD0 1980 aa12.57□□□□□ -0.4
PDPN-210ENST00000513143 NUMA1Q14980 2115 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 HEATR9A2RTY3 570 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 MROH6A6NGR9 719 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 AURKAO14965 403 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 LDB2O43679 373 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 AP1G1O43747 822 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 RNASEH2AO75792 299 aaKnown RBP12.56□□□□□ -0.4
PDPN-210ENST00000513143 APBB3O95704 486 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 CRTAMO95727 393 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 LHCGRP22888 699 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 MMP12P39900 470 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 ELK3P41970 407 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 MAGEA4P43358 317 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 TAS2R38P59533 333 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 FAM193AP78312 1265 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 ELP6Q0PNE2 266 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 RALGDSQ12967 914 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 SLMAPQ14BN4 828 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 FASTKD3Q14CZ7 662 aaKnown RBP12.56□□□□□ -0.4
PDPN-210ENST00000513143 BRD3Q15059 726 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 TAF1AQ15573 450 aaPredicted RBP12.56□□□□□ -0.4
PDPN-210ENST00000513143 CCDC38Q502W7 563 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 ANO7Q6IWH7 933 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 GLT6D1Q7Z4J2 308 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 TMC3Q7Z5M5 1100 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 KBTBD6Q86V97 674 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 CCNJLQ8IV13 435 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 IGDCC3Q8IVU1 814 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 ZBED8Q8IZ13 594 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 TTC30BQ8N4P2 665 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 PPHLN1Q8NEY8 458 aaKnown RBP12.56□□□□□ -0.4
PDPN-210ENST00000513143 AENQ8WTP8 325 aaKnown RBP12.56□□□□□ -0.4
PDPN-210ENST00000513143 PBXIP1Q96AQ6 731 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 STAMBPL1Q96FJ0 436 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 HHIPQ96QV1 700 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 NAT9Q9BTE0 207 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 KIFC1Q9BW19 673 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 TXLNGYQ9BZA5 131 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 ZFYVE1Q9HBF4 777 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 CHRAC1Q9NRG0 131 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDPN-210ENST00000513143 SAMD15Q9P1V8 674 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 USP36Q9P275 1121 aaKnown RBP12.56□□□□□ -0.4
PDPN-210ENST00000513143 EBF1Q9UH73 591 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 SOX13Q9UN79 622 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 NCKAP1Q9Y2A7 1128 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 FADS3Q9Y5Q0 445 aa12.56□□□□□ -0.4
PDPN-210ENST00000513143 TRPM6Q9BX84 2022 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 A0A0U1RQS6 177 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 C1orf232A0A0U1RR37 186 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 FAM237BA0A1B0GVD1 139 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 CCDC151A5D8V7 595 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 C2orf81A6NN90 581 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 A8MX80 341 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 H0Y858 1186 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 K7ESF4 209 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 IGLV3-19P01714 112 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 ZNF30P17039 623 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 PSMA3P25788 255 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 HMGCLP35914 325 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 TPMTP51580 245 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 PDE1BQ01064 536 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 SEMG2Q02383 582 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 PTSQ03393 145 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 SEPT6Q14141 434 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 TMEM52BQ4KMG9 183 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 HP1BP3Q5SSJ5 553 aaPredicted RBP12.55□□□□□ -0.4
PDPN-210ENST00000513143 LRRC66Q68CR7 880 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 CASC4Q6P4E1 433 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 EMBQ6PCB8 327 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 NLRP9Q7RTR0 991 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 LYSMD3Q7Z3D4 306 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 TMEM135Q86UB9 458 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 TSPAN33Q86UF1 283 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 ANKMY2Q8IV38 441 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 PGBD3Q8N328 593 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 CBARPQ8N350 705 aaPredicted RBP12.55□□□□□ -0.4
PDPN-210ENST00000513143 FBXO36Q8NEA4 188 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 GANCQ8TET4 914 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 PYROXD1Q8WU10 500 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 STYXQ8WUJ0 223 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 PEX13Q92968 403 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 EID2BQ96D98 161 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 C19orf43Q9BQ61 176 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 GPR63Q9BZJ6 419 aa12.55□□□□□ -0.4
PDPN-210ENST00000513143 BCCIPQ9P287 314 aaKnown RBP eCLIP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms