RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 ADAMTSL2Q86TH1 951 aa6.3□□□□□ -1.4
CHD1-208ENST00000512392 TICAM1Q8IUC6 712 aa6.3□□□□□ -1.4
CHD1-208ENST00000512392 SRRM1Q8IYB3 904 aaKnown RBP6.3□□□□□ -1.4
CHD1-208ENST00000512392 OR2T3Q8NH03 318 aa6.3□□□□□ -1.4
CHD1-208ENST00000512392 DUSP15Q9H1R2 295 aaPredicted RBP6.3□□□□□ -1.4
CHD1-208ENST00000512392 RHBGQ9H310 441 aa6.3□□□□□ -1.4
CHD1-208ENST00000512392 CCDC134Q9H6E4 229 aa6.3□□□□□ -1.4
CHD1-208ENST00000512392 SETD4Q9NVD3 440 aa6.3□□□□□ -1.4
CHD1-208ENST00000512392 FBXO34Q9NWN3 711 aa6.3□□□□□ -1.4
CHD1-208ENST00000512392 SIDT1Q9NXL6 827 aaKnown RBP6.3□□□□□ -1.4
CHD1-208ENST00000512392 GDE1Q9NZC3 331 aa6.3□□□□□ -1.4
CHD1-208ENST00000512392 PTGFRNQ9P2B2 879 aa6.3□□□□□ -1.4
CHD1-208ENST00000512392 CFAP97Q9P2B7 532 aa6.3□□□□□ -1.4
CHD1-208ENST00000512392 XPR1Q9UBH6 696 aa6.3□□□□□ -1.4
CHD1-208ENST00000512392 CDH22Q9UJ99 828 aa6.3□□□□□ -1.4
CHD1-208ENST00000512392 ANGEL1Q9UNK9 670 aaKnown RBP6.3□□□□□ -1.4
CHD1-208ENST00000512392 PITPNM2Q9BZ72 1349 aa6.3□□□□□ -1.4
CHD1-208ENST00000512392 RSPH10B2B2RC85 870 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 PRICKLE3O43900 615 aaPredicted RBP6.29□□□□□ -1.4
CHD1-208ENST00000512392 FKTNO75072 461 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 GPR32O75388 356 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 MFN2O95140 757 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 MPIG6BO95866 241 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 LCATP04180 440 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 RSPH10BP0C881 870 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 SRFP11831 508 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 AREGP15514 252 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 ACHEP22303 614 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 ADRA1DP25100 572 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 YY1P25490 414 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 CPOXP36551 454 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 SUOXP51687 545 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 SPIBQ01892 262 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 GAD2Q05329 585 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 GRIN1Q05586 938 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 NIPAL4Q0D2K0 466 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 ZXDCQ2QGD7 858 aaPredicted RBP6.29□□□□□ -1.4
CHD1-208ENST00000512392 FBLN7Q53RD9 439 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 ZNF772Q68DY9 489 aaPredicted RBP6.29□□□□□ -1.4
CHD1-208ENST00000512392 SLC9A4Q6AI14 798 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 C6orf89Q6UWU4 347 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 TOM1L2Q6ZVM7 507 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 SPATA21Q7Z572 469 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 TRABD2AQ86V40 505 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 ERO1BQ86YB8 467 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 SLC15A3Q8IY34 581 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 TMEM52Q8NDY8 209 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 TRIM58Q8NG06 486 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 OCC1Q8TAD7 63 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 FAM149B1Q96BN6 582 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 LRRC39Q96DD0 335 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 DTD2Q96FN9 168 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 ZBTB18Q99592 522 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 C17orf80Q9BSJ5 609 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 ECT2Q9H8V3 914 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 TBC1D13Q9NVG8 400 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 IL20Q9NYY1 176 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 PLAGL1Q9UM63 463 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 ACTL7AQ9Y615 435 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 HSBP1L1C9JCN9 74 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 H3BS24 57 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 AVILO75366 819 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 GALTP07902 379 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 SYPP08247 313 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 CYP3A4P08684 503 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 VCLP18206 1134 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 MYF6P23409 242 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 CSF2RBP32927 897 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 HTR7P34969 479 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 FRKP42685 505 aaPredicted RBP6.29□□□□□ -1.4
CHD1-208ENST00000512392 EFNA5P52803 228 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 PNLIPRP2P54317 469 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 CTXN1P60606 82 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 ACTR3P61158 418 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 MZT1Q08AG7 82 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 BNIP3Q12983 259 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 LCP2Q13094 533 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 OLIG2Q13516 323 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 HSP90AA4PQ58FG1 418 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 SGO1Q5FBB7 561 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 KANK2Q63ZY3 851 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 COMTD1Q86VU5 262 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 REPS2Q8NFH8 660 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 SMARCC2Q8TAQ2 1214 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 GOLGA5Q8TBA6 731 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 CKAP2Q8WWK9 683 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 SELENOMQ8WWX9 145 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 FAM227BQ96M60 508 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 FCRL4Q96PJ5 515 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 MTMR9Q96QG7 549 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 PINK1Q9BXM7 581 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 MRPL1Q9BYD6 325 aaKnown RBP6.29□□□□□ -1.4
CHD1-208ENST00000512392 MRPL37Q9BZE1 423 aaKnown RBP6.29□□□□□ -1.4
CHD1-208ENST00000512392 IMPG2Q9BZV3 1241 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 VCX2Q9H322 139 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 XPNPEP3Q9NQH7 507 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 MRPS18AQ9NVS2 196 aaKnown RBP6.29□□□□□ -1.4
CHD1-208ENST00000512392 DONSONQ9NYP3 566 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 OR6C2Q9NZP2 312 aa6.29□□□□□ -1.4
CHD1-208ENST00000512392 HDAC6Q9UBN7 1215 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms