RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 SAMD4BQ5PRF9 694 aaKnown RBP13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 TMEM154Q6P9G4 183 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 TCF25Q9BQ70 676 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 ADNPQ9H2P0 1102 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 GIMAP4Q9NUV9 329 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 FNIP2Q9P278 1114 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 DEC1Q9P2X7 70 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 TMCO1Q9UM00 188 aa13.14□□□□□ -0.31
PCDHA4-202ENST00000512229 CCDC154A6NI56 674 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 C1QTNF3-AMACRE9PGA6 284 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 QSOX1O00391 747 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 TGDSO95455 350 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 ADH1CP00326 375 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 GALTP07902 379 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 MAGEA11P43364 429 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 AP1S1P61966 158 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 GALNT2Q10471 571 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 CCDC142Q17RM4 750 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 KIAA0930Q6ICG6 404 aaPredicted RBP13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 TMEM130Q8N3G9 435 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 CDYL2Q8N8U2 506 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 SELENOMQ8WWX9 145 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 ERLEC1Q96DZ1 483 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 FAM120BQ96EK7 910 aaKnown RBP13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 VPS50Q96JG6 964 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 TEX12Q9BXU0 123 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 PIF1Q9H611 641 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 AZIN1O14977 448 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 UGT1A9O60656 530 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 IPO13O94829 963 aaKnown RBP13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 PTPN2P17706 415 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 KPNB1Q14974 876 aaKnown RBP13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 OOSP2Q86WS3 158 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 PCDH20Q8N6Y1 951 aaKnown RBP13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 AUTS2Q8WXX7 1259 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 NMUR2Q9GZQ4 415 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 CDH19Q9H159 772 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 UGT1A7Q9HAW7 530 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 UGT1A10Q9HAW8 530 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 UGT1A8Q9HAW9 530 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 SH3BP4Q9P0V3 963 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 GRIN2DO15399 1336 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 ULK1O75385 1050 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 CPSF4O95639 269 aaKnown RBP13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 HLA-DQB2P05538 268 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 UBTFL6P0CB48 400 aaPredicted RBP13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 COX4I1P13073 169 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 PKNOX1P55347 436 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 GPX6P59796 221 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 PRMT9Q6P2P2 845 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 DOK6Q6PKX4 331 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 FITM2Q8N6M3 262 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 WDR41Q9HAD4 459 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 SLC28A3Q9HAS3 691 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 DLGAP2Q9P1A6 1054 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 TRAF6Q9Y4K3 522 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 ZMPSTE24O75844 475 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 HGFP14210 728 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 GPR1P46091 355 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 HSPA13P48723 471 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 ACSM2AQ08AH3 577 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 UBAP2LQ14157 1087 aaKnown RBP13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 WLSQ5T9L3 541 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 CST9Q5W186 159 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 ACSM2BQ68CK6 577 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 TXNDC11Q6PKC3 985 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 OTUB1Q96FW1 271 aaPredicted RBP13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 MARK4Q96L34 752 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 TMEM209Q96SK2 561 aa13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 WDR55Q9H6Y2 383 aaPredicted RBP13.13□□□□□ -0.31
PCDHA4-202ENST00000512229 PRR5-ARHGAP8B1AHC4 643 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 H0YGN5 161 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 DNM1LO00429 736 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 MAGEC1O60732 1142 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 ALBP02768 609 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 ZNF23P17027 643 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 GPC1P35052 558 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 ARHGAP8P85298 464 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 ARL13AQ5H913 290 aaPredicted RBP13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 DHFR2Q86XF0 187 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 CHPFQ8IZ52 775 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 NAF1Q96HR8 494 aaKnown RBP13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 NSMCE2Q96MF7 247 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 TCF12Q99081 682 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 GATA5Q9BWX5 397 aaPredicted RBP13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 COMMD8Q9NX08 183 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 AHSPQ9NZD4 102 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 MFHAS1Q9Y4C4 1052 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 NFS1Q9Y697 457 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 C15orf38-AP3S2A0A0A6YYH1 394 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 MGEA5O60502 916 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 SNRPB2P08579 225 aaKnown RBP13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 HAPLN1P10915 354 aaPredicted RBP13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 EEF1DP29692 281 aaKnown RBP13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 FOXN2P32314 431 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 NCALDP61601 193 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 ZNF33AQ06730 810 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 DLG2Q15700 870 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 UBXN11Q5T124 520 aa13.12□□□□□ -0.31
PCDHA4-202ENST00000512229 MSANTD2Q6P1R3 559 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms