RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 IQCHQ86VS3 1027 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 PRELID2Q8N945 189 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 TMEM145Q8NBT3 493 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 IPMKQ8NFU5 416 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 KLK6Q92876 244 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 LENG8Q96PV6 779 aaPredicted RBP12.9□□□□□ -0.34
COL6A6-203ENST00000511332 LYSMD1Q96S90 227 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 SRPK1Q96SB4 655 aaKnown RBP12.9□□□□□ -0.34
COL6A6-203ENST00000511332 MLPHQ9BV36 600 aaPredicted RBP12.9□□□□□ -0.34
COL6A6-203ENST00000511332 ZDHHC5Q9C0B5 715 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 SMOC1Q9H4F8 434 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 EBF2Q9HAK2 575 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 CAPN10Q9HC96 672 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 PARD6AQ9NPB6 346 aa12.9□□□□□ -0.34
COL6A6-203ENST00000511332 DRG1Q9Y295 367 aaKnown RBP12.9□□□□□ -0.34
COL6A6-203ENST00000511332 FAM186AA6NE01 2351 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 LNP1A1A4G5 178 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 A6NNZ2 444 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 PATE3B3GLJ2 98 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 FPGTO14772 594 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 VILLO15195 856 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 ZNF185O15231 689 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 PAK4O96013 591 aaPredicted RBP12.89□□□□□ -0.35
COL6A6-203ENST00000511332 FGF1P05230 155 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 ALPIP09923 528 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 LHCGRP22888 699 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 CASQ1P31415 396 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 HNF1BP35680 557 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 C21orf59P57076 290 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 FGL2Q14314 439 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 CYP1B1Q16678 543 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 QPCTQ16769 361 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 PARP6Q2NL67 630 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 AASDHQ4L235 1098 aaPredicted RBP12.89□□□□□ -0.35
COL6A6-203ENST00000511332 FAM182AQ5T1J6 154 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 TCEAL6Q6IPX3 200 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 C4orf22Q6V702 233 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 KYAT3Q6YP21 454 aaKnown RBP12.89□□□□□ -0.35
COL6A6-203ENST00000511332 KDELC2Q7Z4H8 507 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 DCLK2Q8N568 766 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 MFSD2AQ8NA29 543 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 TCEAL3Q969E4 200 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 MRGPRX2Q96LB1 330 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 MYOCQ99972 504 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 GORASP1Q9BQQ3 440 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 AP1M1Q9BXS5 423 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 FZD3Q9NPG1 666 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 PAK5Q9P286 719 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 SLCO1B1Q9Y6L6 691 aa12.89□□□□□ -0.35
COL6A6-203ENST00000511332 ZFHX2Q9C0A1 2572 aaPredicted RBP12.88□□□□□ -0.35
COL6A6-203ENST00000511332 C1orf232A0A0U1RR37 186 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 LOC285095A0A1B0GVY8 99 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 ERI2A8K979 691 aaKnown RBP12.88□□□□□ -0.35
COL6A6-203ENST00000511332 A8MX80 341 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 PSMD3O43242 534 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 PHF2O75151 1096 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 TGM1P22735 817 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 FDFT1P37268 417 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 PAFAH1B1P43034 410 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 FNTAP49354 379 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 CSNK1EP49674 416 aaKnown RBP12.88□□□□□ -0.35
COL6A6-203ENST00000511332 SEMG2Q02383 582 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 GRIK2Q13002 908 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 LRRC14Q15048 493 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 ACOX1Q15067 660 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 IRF4Q15306 451 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 SF3A2Q15428 464 aaKnown RBP12.88□□□□□ -0.35
COL6A6-203ENST00000511332 SLC1A5Q15758 541 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 LRRC66Q68CR7 880 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 IL27RAQ6UWB1 636 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 SYT10Q6XYQ8 523 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 GCNT7Q6ZNI0 430 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 NYAP1Q6ZVC0 841 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 PTAR1Q7Z6K3 402 aaPredicted RBP12.88□□□□□ -0.35
COL6A6-203ENST00000511332 ABI3BPQ7Z7G0 1075 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 TSPAN33Q86UF1 283 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 KLHDC8BQ8IXV7 354 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 RAVER1Q8IY67 606 aaKnown RBP12.88□□□□□ -0.35
COL6A6-203ENST00000511332 CCHCR1Q8TD31 782 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 GRK7Q8WTQ7 553 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 MAGOHBQ96A72 148 aaKnown RBP12.88□□□□□ -0.35
COL6A6-203ENST00000511332 NUS1Q96E22 293 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 CAPZA3Q96KX2 299 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 C16orf45Q96MC5 204 aaPredicted RBP12.88□□□□□ -0.35
COL6A6-203ENST00000511332 COQ10AQ96MF6 247 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 KLF6Q99612 283 aaPredicted RBP12.88□□□□□ -0.35
COL6A6-203ENST00000511332 EDEM2Q9BV94 578 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 FICDQ9BVA6 458 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 LRRC40Q9H9A6 602 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 MAGEE1Q9HCI5 957 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 SMARCAL1Q9NZC9 954 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 HACD3Q9P035 362 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 RNF14Q9UBS8 474 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 COQ6Q9Y2Z9 468 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 HS3ST3A1Q9Y663 406 aa12.88□□□□□ -0.35
COL6A6-203ENST00000511332 A0A1W2PR77 199 aa12.87□□□□□ -0.35
COL6A6-203ENST00000511332 E7EVH7 732 aa12.87□□□□□ -0.35
COL6A6-203ENST00000511332 KIF2AO00139 706 aaPredicted RBP12.87□□□□□ -0.35
COL6A6-203ENST00000511332 ARHGAP33O14559 1287 aa12.87□□□□□ -0.35
COL6A6-203ENST00000511332 TOR1BO14657 336 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms