RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 MAPK13O15264 365 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 CCNYL3P0C7X3 344 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 HTR1EP28566 365 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 HNRNPH3P31942 346 aaKnown RBP10.8□□□□□ -0.68
SNF8-207ENST00000509995 PTGIRP43119 386 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 NDST2P52849 883 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 AMPD3Q01432 767 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 SRSF11Q05519 484 aaKnown RBP10.8□□□□□ -0.68
SNF8-207ENST00000509995 ILF3Q12906 894 aaKnown RBP eCLIP10.8□□□□□ -0.68
SNF8-207ENST00000509995 IL10RAQ13651 578 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 AGERQ15109 404 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 E2F4Q16254 413 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 TMEM52BQ4KMG9 183 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 CRB2Q5IJ48 1285 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 KRT39Q6A163 491 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 SLC30A9Q6PML9 568 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 BNC2Q6ZN30 1099 aaPredicted RBP10.8□□□□□ -0.68
SNF8-207ENST00000509995 INTS8Q75QN2 995 aaKnown RBP10.8□□□□□ -0.68
SNF8-207ENST00000509995 ZNF761Q86XN6 746 aaPredicted RBP10.8□□□□□ -0.68
SNF8-207ENST00000509995 PLA2G15Q8NCC3 412 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 SMAD5Q99717 465 aaKnown RBP10.8□□□□□ -0.68
SNF8-207ENST00000509995 MDFIQ99750 246 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 BRD8Q9H0E9 1235 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 DDIT4Q9NX09 232 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 GPR83Q9NYM4 423 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 COX16Q9P0S2 106 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 USP25Q9UHP3 1055 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 LNPEPQ9UIQ6 1025 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 MOSPD1Q9UJG1 213 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 PADI1Q9ULC6 663 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 KIAA1257Q9ULG3 409 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 ACTL7AQ9Y615 435 aa10.8□□□□□ -0.68
SNF8-207ENST00000509995 NSD1Q96L73 2696 aaPredicted RBP10.8□□□□□ -0.68
SNF8-207ENST00000509995 CACNA1CQ13936 2221 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 A0A1B0GUH1 482 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 SSU72P8A0A1W2PR75 194 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 GOLGA6L3A6NEY3 463 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 E2F3O00716 465 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 PAGE1O75459 146 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 NDUFA10O95299 355 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 AK4P27144 223 aaPredicted RBP10.79□□□□□ -0.68
SNF8-207ENST00000509995 RPL34P49207 117 aaKnown RBP10.79□□□□□ -0.68
SNF8-207ENST00000509995 RPS18P62269 152 aaKnown RBP10.79□□□□□ -0.68
SNF8-207ENST00000509995 ELP6Q0PNE2 266 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 MTA1Q13330 715 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 CUL2Q13617 745 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 ZNF630Q2M218 657 aaPredicted RBP10.79□□□□□ -0.68
SNF8-207ENST00000509995 VWA2Q5GFL6 755 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 GDPD4Q6W3E5 623 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 TFAP2DQ7Z6R9 452 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 SYVN1Q86TM6 617 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 FBXL13Q8NEE6 735 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 OR2AP1Q8NGE2 309 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 ITLN2Q8WWU7 325 aaPredicted RBP10.79□□□□□ -0.68
SNF8-207ENST00000509995 RUFY1Q96T51 708 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 SLC38A3Q99624 504 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 C7orf25Q9BPX7 421 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 ZSWIM1Q9BR11 485 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 SPON2Q9BUD6 331 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 ILKAPQ9H0C8 392 aaPredicted RBP10.79□□□□□ -0.68
SNF8-207ENST00000509995 KCTD10Q9H3F6 313 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 CUEDC2Q9H467 287 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 SUDS3Q9H7L9 328 aaPredicted RBP10.79□□□□□ -0.68
SNF8-207ENST00000509995 CARS2Q9HA77 564 aaKnown RBP10.79□□□□□ -0.68
SNF8-207ENST00000509995 ATP13A1Q9HD20 1204 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 LHX9Q9NQ69 397 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 AGPAT4Q9NRZ5 378 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 RAB20Q9NX57 234 aa10.79□□□□□ -0.68
SNF8-207ENST00000509995 PIKFYVEQ9Y2I7 2098 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 POP4O95707 220 aaKnown RBP10.78□□□□□ -0.68
SNF8-207ENST00000509995 CD160O95971 181 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 GSRP00390 522 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 STSP08842 583 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 HOXC4P09017 264 aaPredicted RBP10.78□□□□□ -0.68
SNF8-207ENST00000509995 PTPN4P29074 926 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 OR1E1P30953 314 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 FASLGP48023 281 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 MXI1P50539 228 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 ART1P52961 327 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 YWHAEP62258 255 aaKnown RBP10.78□□□□□ -0.68
SNF8-207ENST00000509995 YWHAZP63104 245 aaKnown RBP10.78□□□□□ -0.68
SNF8-207ENST00000509995 ENPEPQ07075 957 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 ADAM9Q13443 819 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 LAMB3Q13751 1172 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 CNGA2Q16280 664 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 ZNF783Q6ZMS7 281 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 TAOK1Q7L7X3 1001 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 RASGRP3Q8IV61 690 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 INPP5DQ92835 1189 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 LGR4Q9BXB1 951 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 GPR87Q9BY21 358 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 SIK2Q9H0K1 926 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 ST7Q9NRC1 585 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 TRNAU1APQ9NX07 287 aaKnown RBP10.78□□□□□ -0.68
SNF8-207ENST00000509995 KLHL3Q9UH77 587 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 PCDHGA10Q9Y5H3 936 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 ST14Q9Y5Y6 855 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 COL6A5A8TX70 2615 aa10.78□□□□□ -0.68
SNF8-207ENST00000509995 ABCA4P78363 2273 aa10.77□□□□□ -0.69
SNF8-207ENST00000509995 ILVBLA1L0T0 632 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms