RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 XPAP23025 273 aaPredicted RBP15.97■□□□□ 0.15
RAB40C-202ENST00000509637 NDST2P52849 883 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 TPI1P60174 286 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 NFATC3Q12968 1075 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 MAMLD1Q13495 774 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 IHHQ14623 411 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 NCAPHQ15003 741 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 C14orf28Q4W4Y0 310 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 SPECC1LQ69YQ0 1117 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 ACAD10Q6JQN1 1059 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 BRAT1Q6PJG6 821 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 DPPA4Q7L190 304 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 TAF8Q7Z7C8 310 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 COQ10AQ96MF6 247 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 CATSPERBQ9H7T0 1116 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 RDH14Q9HBH5 336 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 CYP4F12Q9HCS2 524 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 LRIT1Q9P2V4 623 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 LIMA1Q9UHB6 759 aaKnown RBP15.97■□□□□ 0.15
RAB40C-202ENST00000509637 PCSK1NQ9UHG2 260 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 PLEKHM1Q9Y4G2 1056 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 BSNQ9UPA5 3926 aa15.97■□□□□ 0.15
RAB40C-202ENST00000509637 CAPN8A6NHC0 703 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 B4DGG1 531 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 FGF1P05230 155 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 TCF4P15884 667 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 ERCC2P18074 760 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 TNFAIP3P21580 790 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 AK4P27144 223 aaPredicted RBP15.96■□□□□ 0.15
RAB40C-202ENST00000509637 HTR1BP28222 390 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 OR1D5P58170 312 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 SLC10A7Q0GE19 358 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 EIF3IQ13347 325 aaKnown RBP15.96■□□□□ 0.15
RAB40C-202ENST00000509637 CT47A1Q5JQC4 288 aaPredicted RBP15.96■□□□□ 0.15
RAB40C-202ENST00000509637 E4F1Q66K89 784 aaPredicted RBP15.96■□□□□ 0.15
RAB40C-202ENST00000509637 PNCKQ6P2M8 343 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 RBM43Q6ZSC3 357 aaKnown RBP15.96■□□□□ 0.15
RAB40C-202ENST00000509637 USP53Q70EK8 1073 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 SCG3Q8WXD2 468 aaKnown RBP15.96■□□□□ 0.15
RAB40C-202ENST00000509637 TUBGCP5Q96RT8 1024 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 NUDT22Q9BRQ3 303 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 DHX35Q9H5Z1 703 aaKnown RBP15.96■□□□□ 0.15
RAB40C-202ENST00000509637 ETNK2Q9NVF9 386 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 WDR70Q9NW82 654 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 CHMP5Q9NZZ3 219 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 B4GALT6Q9UBX8 382 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 DACH1Q9UI36 760 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 AP4E1Q9UPM8 1137 aa15.96■□□□□ 0.15
RAB40C-202ENST00000509637 CFAP69A5D8W1 941 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 LRRC10BA6NIK2 292 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 LGALS16A8MUM7 142 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 FGF10O15520 208 aaPredicted RBP15.95■□□□□ 0.14
RAB40C-202ENST00000509637 PALMO75781 387 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 WISP1O95388 367 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 CEACAM5P06731 702 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 HOXC4P09017 264 aaPredicted RBP15.95■□□□□ 0.14
RAB40C-202ENST00000509637 FAM87AP0C7U9 286 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 CR2P20023 1033 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 POLD2P49005 469 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 CLCA4Q14CN2 919 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 CNGA3Q16281 694 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 TBR1Q16650 682 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 PLEKHA7Q6IQ23 1121 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 HSD11B1LQ7Z5J1 315 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 GPBAR1Q8TDU6 330 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 JPH3Q8WXH2 748 aaPredicted RBP15.95■□□□□ 0.14
RAB40C-202ENST00000509637 SGF29Q96ES7 293 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 TMEM74Q96NL1 305 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 ERGIC2Q96RQ1 377 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 CLMPQ9H6B4 373 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 SUDS3Q9H7L9 328 aaPredicted RBP15.95■□□□□ 0.14
RAB40C-202ENST00000509637 STARD5Q9NSY2 213 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 SEPT11Q9NVA2 429 aaKnown RBP15.95■□□□□ 0.14
RAB40C-202ENST00000509637 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.95■□□□□ 0.14
RAB40C-202ENST00000509637 CWC15Q9P013 229 aaKnown RBP15.95■□□□□ 0.14
RAB40C-202ENST00000509637 PCDHGC4Q9Y5F7 938 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 PCDHGA4Q9Y5G9 962 aa15.95■□□□□ 0.14
RAB40C-202ENST00000509637 BOD1L1Q8NFC6 3051 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 PRSS38A1L453 326 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 TMCO5BA8MYB1 307 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 EEF2KO00418 725 aaKnown RBP15.94■□□□□ 0.14
RAB40C-202ENST00000509637 TERTO14746 1132 aaKnown RBP15.94■□□□□ 0.14
RAB40C-202ENST00000509637 TNFRSF10CO14798 259 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 TEX33O43247 280 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 HTRA2O43464 458 aaPredicted RBP15.94■□□□□ 0.14
RAB40C-202ENST00000509637 LIPCP11150 499 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 PNLIPP16233 465 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 LHCGRP22888 699 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 IL1R2P27930 398 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 CD1CP29017 333 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 SCNN1BP51168 640 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 MAPK10P53779 464 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 GRM3Q14832 879 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 ERAP2Q6P179 960 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 RFX8Q6ZV50 586 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 ZNF438Q7Z4V0 828 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 RCBTB1Q8NDN9 531 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 FUCA2Q9BTY2 467 aa15.94■□□□□ 0.14
RAB40C-202ENST00000509637 FRMD8Q9BZ67 464 aaPredicted RBP15.94■□□□□ 0.14
RAB40C-202ENST00000509637 STRADBQ9C0K7 418 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms