RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 PCDHGA4Q9Y5G9 962 aa13.43□□□□□ -0.26
DDX41-210ENST00000509576 TMEM110-MUSTN1A8MSY1 372 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 NVLO15381 856 aaKnown RBP13.42□□□□□ -0.26
DDX41-210ENST00000509576 WISP1O95388 367 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 TCF4P15884 667 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 GLB1P16278 677 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 TNFAIP3P21580 790 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 SUOXP51687 545 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 RAD51Q06609 339 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 IHHQ14623 411 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 CLCA4Q14CN2 919 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 C14orf28Q4W4Y0 310 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 E4F1Q66K89 784 aaPredicted RBP13.42□□□□□ -0.26
DDX41-210ENST00000509576 SPECC1LQ69YQ0 1117 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 BRAT1Q6PJG6 821 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 DPPA4Q7L190 304 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 GKN2Q86XP6 184 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 MCOLN2Q8IZK6 566 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 CBARPQ8N350 705 aaPredicted RBP13.42□□□□□ -0.26
DDX41-210ENST00000509576 PGBD5Q8N414 524 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 FAM46DQ8NEK8 389 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 OR56A4Q8NGH8 313 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 USP7Q93009 1102 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 COQ10AQ96MF6 247 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 ZNF641Q96N77 438 aaPredicted RBP13.42□□□□□ -0.26
DDX41-210ENST00000509576 AGPAT1Q99943 283 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 NCAPGQ9BPX3 1015 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 FUCA2Q9BTY2 467 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 SNRNP25Q9BV90 132 aaKnown RBP13.42□□□□□ -0.26
DDX41-210ENST00000509576 NUP62CLQ9H1M0 184 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 CLMPQ9H6B4 373 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 B4GALT6Q9UBX8 382 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 DOLKQ9UPQ8 538 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 PLEKHM1Q9Y4G2 1056 aa13.42□□□□□ -0.26
DDX41-210ENST00000509576 PCYT1BQ9Y5K3 369 aaPredicted RBP13.42□□□□□ -0.26
DDX41-210ENST00000509576 TNFP01375 233 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 FGF1P05230 155 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 CALB1P05937 261 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 LIPCP11150 499 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 CR2P20023 1033 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 LHCGRP22888 699 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 AK4P27144 223 aaPredicted RBP13.41□□□□□ -0.26
DDX41-210ENST00000509576 CSF2RBP32927 897 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 STAT1P42224 750 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 CSNK1DP48730 415 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 NDST2P52849 883 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 OR1D5P58170 312 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 TPI1P60174 286 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 SLC10A7Q0GE19 358 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 EIF3IQ13347 325 aaKnown RBP13.41□□□□□ -0.26
DDX41-210ENST00000509576 CNGA3Q16281 694 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 TBR1Q16650 682 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 DNAJC24Q6P3W2 148 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 RBM43Q6ZSC3 357 aaKnown RBP13.41□□□□□ -0.26
DDX41-210ENST00000509576 ZNF438Q7Z4V0 828 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 IRF2BP2Q7Z5L9 587 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 TAF8Q7Z7C8 310 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 RCBTB1Q8NDN9 531 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 JPH3Q8WXH2 748 aaPredicted RBP13.41□□□□□ -0.26
DDX41-210ENST00000509576 SGF29Q96ES7 293 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 TUBGCP5Q96RT8 1024 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 CATSPERBQ9H7T0 1116 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 CYP4F12Q9HCS2 524 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 ETNK2Q9NVF9 386 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 TMEM9Q9P0T7 183 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 LRIT1Q9P2V4 623 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 AP4E1Q9UPM8 1137 aa13.41□□□□□ -0.26
DDX41-210ENST00000509576 PRSS38A1L453 326 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 CAPN8A6NHC0 703 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 LGALS16A8MUM7 142 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 FGF10O15520 208 aaPredicted RBP13.4□□□□□ -0.26
DDX41-210ENST00000509576 SOD1P00441 154 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 CEACAM5P06731 702 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 ERCC2P18074 760 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 XPAP23025 273 aaPredicted RBP13.4□□□□□ -0.26
DDX41-210ENST00000509576 HTR1BP28222 390 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 POLD2P49005 469 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 MAMLD1Q13495 774 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 NR1D2Q14995 579 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 NCAPHQ15003 741 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 ACAD10Q6JQN1 1059 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 PNCKQ6P2M8 343 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 PRICKLE2Q7Z3G6 844 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 HSD11B1LQ7Z5J1 315 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 GPBAR1Q8TDU6 330 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 TMEM74Q96NL1 305 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 FRMD8Q9BZ67 464 aaPredicted RBP13.4□□□□□ -0.26
DDX41-210ENST00000509576 DHX35Q9H5Z1 703 aaKnown RBP13.4□□□□□ -0.26
DDX41-210ENST00000509576 LMBRD1Q9NUN5 540 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 WDR70Q9NW82 654 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.4□□□□□ -0.26
DDX41-210ENST00000509576 LIMA1Q9UHB6 759 aaKnown RBP13.4□□□□□ -0.26
DDX41-210ENST00000509576 PCSK1NQ9UHG2 260 aa13.4□□□□□ -0.26
DDX41-210ENST00000509576 IGHV5-10-1A0A0J9YXX1 117 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 CFAP69A5D8W1 941 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 TNFRSF10CO14798 259 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 PPM1DO15297 605 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 HTRA2O43464 458 aaPredicted RBP13.39□□□□□ -0.27
DDX41-210ENST00000509576 PALMO75781 387 aa13.39□□□□□ -0.27
DDX41-210ENST00000509576 HOXC4P09017 264 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms