RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 EOMESO95936 686 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 ATXN1LP0C7T5 689 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 YWHAQP27348 245 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 PMLP29590 882 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 STX1BP61266 288 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 IHHQ14623 411 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 FAM26DQ5JW98 314 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 CWF19L1Q69YN2 538 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 MRNIPQ6NTE8 343 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 SPNS2Q8IVW8 549 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 LILRA2Q8N149 483 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 PEX13Q92968 403 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 FBXO32Q969P5 355 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 RRAGCQ9HB90 399 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 SPAG4Q9NPE6 437 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 SARDHQ9UL12 918 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 SQORQ9Y6N5 450 aa17.98■□□□□ 0.47
CCHCR1-228ENST00000509552 E7ENX8 843 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 TMEM189-UBE2V1I3L0A0 370 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 KIF3CO14782 793 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 TBX18O95935 607 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 SLC4A1P02730 911 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 HLA-DPA1P20036 260 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 MAGEA11P43364 429 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 INHBEP58166 350 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 NFKB2Q00653 900 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 DSC1Q08554 894 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 SERINC3Q13530 473 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 CNPY1Q3B7I2 92 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 ACBD5Q5T8D3 534 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 PIM3Q86V86 326 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 TICAM1Q8IUC6 712 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 PGBD5Q8N414 524 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 HMGCLL1Q8TB92 370 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 BLOC1S5Q8TDH9 187 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 TBATAQ96M53 351 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 SH3GL3Q99963 347 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 SEMA3CQ99985 751 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 MARCH2Q9P0N8 246 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 PRG3Q9Y2Y8 225 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 KCTD3Q9Y597 815 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 AP4B1Q9Y6B7 739 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 DRGXA6NNA5 263 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 CRTAMO95727 393 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 FGF1P05230 155 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 HMBSP08397 361 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 GSTT1P30711 240 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 OR1E1P30953 314 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 HERVK_113P63132 956 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 CRHR2Q13324 411 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 ZNF235Q14590 738 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 C10orf120Q5SQS8 335 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 CLEC6AQ6EIG7 209 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 RAB44Q7Z6P3 723 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 FAM193BQ96PV7 902 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 ASB2Q96Q27 587 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 ERVK-6Q9BXR3 956 aa17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 TLR8Q9NR97 1041 aaKnown RBP17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 TRMT13Q9NUP7 481 aaKnown RBP17.97■□□□□ 0.47
CCHCR1-228ENST00000509552 DOCK4Q8N1I0 1966 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 EME2A4GXA9 379 aaPredicted RBP17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 FBP2O00757 339 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 UBFD1O14562 309 aaKnown RBP17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 MRASO14807 208 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 CD3EAPO15446 510 aaKnown RBP17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 GOT2P00505 430 aaKnown RBP17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 PABPC4LP0CB38 370 aaKnown RBP17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 FDXRP22570 491 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 ATP4BP51164 291 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 YBEYP58557 167 aaPredicted RBP17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 ACVR1Q04771 509 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 TRAP1Q12931 704 aaKnown RBP17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 VARS2Q5ST30 1063 aaKnown RBP17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 PAOXQ6QHF9 649 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 SLC24A5Q71RS6 500 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 COLGALT2Q8IYK4 626 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 CLYBLQ8N0X4 340 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 RYBPQ8N488 228 aaPredicted RBP17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 OR52K2Q8NGK3 314 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 RIN3Q8TB24 985 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 GPR152Q8TDT2 470 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 C19orf60Q96EN9 201 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 FEM1CQ96JP0 617 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 IL37Q9NZH6 218 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 NDUFA13Q9P0J0 144 aa17.96■□□□□ 0.47
CCHCR1-228ENST00000509552 SLC12A8A0AV02 714 aa17.95■□□□□ 0.46
CCHCR1-228ENST00000509552 NRP2O60462 931 aa17.95■□□□□ 0.46
CCHCR1-228ENST00000509552 SRP72O76094 671 aaKnown RBP17.95■□□□□ 0.46
CCHCR1-228ENST00000509552 RTN3O95197 1032 aaPredicted RBP17.95■□□□□ 0.46
CCHCR1-228ENST00000509552 ARSAP15289 507 aa17.95■□□□□ 0.46
CCHCR1-228ENST00000509552 CD1DP15813 335 aa17.95■□□□□ 0.46
CCHCR1-228ENST00000509552 TSPAN8P19075 237 aa17.95■□□□□ 0.46
CCHCR1-228ENST00000509552 KCNC1P48547 511 aa17.95■□□□□ 0.46
CCHCR1-228ENST00000509552 FCGRTP55899 365 aa17.95■□□□□ 0.46
CCHCR1-228ENST00000509552 CTXN3Q4LDR2 81 aa17.95■□□□□ 0.46
CCHCR1-228ENST00000509552 UNC50Q53HI1 259 aa17.95■□□□□ 0.46
CCHCR1-228ENST00000509552 LARP4Q71RC2 724 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCHCR1-228ENST00000509552 GPR150Q8NGU9 434 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms