RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 NMBRP28336 390 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 RFC2P35250 354 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 ACVRL1P37023 503 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 CHRNA4P43681 627 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 NUDT2P50583 147 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 AQP4P55087 323 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 PLD1Q13393 1074 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 MAP7Q14244 749 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 USP10Q14694 798 aaKnown RBP11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 POLD3Q15054 466 aaPredicted RBP11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 MAPRE2Q15555 327 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 ADRM1Q16186 407 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 GRAMD1BQ3KR37 738 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 LSM12Q3MHD2 195 aaKnown RBP11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 PIGGQ5H8A4 983 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 TCHHL1Q5QJ38 904 aaPredicted RBP11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 OTOP2Q7RTS6 562 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 ZC3HC1Q86WB0 502 aaKnown RBP11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 CNTN4Q8IWV2 1026 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 DSELQ8IZU8 1212 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 LGI2Q8N0V4 545 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 CCDC126Q96EE4 140 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 MRGPRX2Q96LB1 330 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 C1QTNF1Q9BXJ1 281 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 FSD1LQ9BXM9 530 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 SP110Q9HB58 689 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 NT5MQ9NPB1 228 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 GKN1Q9NS71 199 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 IARS2Q9NSE4 1012 aaKnown RBP11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 FNIP2Q9P278 1114 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 EPS15L1Q9UBC2 864 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 SLC39A10Q9ULF5 831 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 A0A087X1B8 175 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 A0A0D9SEW6 157 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 ANKRD33BA6NCL7 494 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 AIM2O14862 343 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 PIGNO95427 931 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 KLKB1P03952 638 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 CAPNS1P04632 268 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 PAMP19021 973 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 ADRA1AP35348 466 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 GMPRP36959 345 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 DNAJB13P59910 316 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 ART3Q13508 389 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 FLOT2Q14254 428 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 IHHQ14623 411 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 HECTD3Q5T447 861 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 PRPF38BQ5VTL8 546 aaKnown RBP11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 PKN3Q6P5Z2 889 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 UGT2A3Q6UWM9 527 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 TMC7Q7Z402 723 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 SNX32Q86XE0 403 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 LRRC49Q8IUZ0 686 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 DENND1CQ8IV53 801 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 ALDH16A1Q8IZ83 802 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 OR52K2Q8NGK3 314 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 DGCR14Q96DF8 476 aaKnown RBP11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 SCYL1Q96KG9 808 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 ZFRQ96KR1 1074 aaKnown RBP11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 OR52B2Q96RD2 323 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 SHCBP1LQ9BZQ2 653 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 RNF38Q9H0F5 515 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 ZNF385DQ9H6B1 395 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 RUVBL2Q9Y230 463 aaKnown RBP11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 XIRP2A4UGR9 3374 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 E2F8A0AVK6 867 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 F5H5T6 163 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 PRRG1O14668 218 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 SCAMP3O14828 347 aaKnown RBP11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 MAP3K13O43283 966 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 GRID2O43424 1007 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 BCAS2O75934 225 aaPredicted RBP11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 URODP06132 367 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 SPATA31D3P0C874 917 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 IRF1P10914 325 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 ETFBP38117 255 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 CD86P42081 329 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 RPL5P46777 297 aaKnown RBP11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 RENBPP51606 427 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 SGSHP51688 502 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 KPNA1P52294 538 aaPredicted RBP11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 RPS24P62847 133 aaKnown RBP11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 IRF9Q00978 393 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 ITKQ08881 620 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 TWF1Q12792 350 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 SERINC3Q13530 473 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 ADGRE1Q14246 886 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 GRM3Q14832 879 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 CNGA3Q16281 694 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 TAF12Q16514 161 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 LRRC36Q1X8D7 754 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 ZNF423Q2M1K9 1284 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 ARL13AQ5H913 290 aaPredicted RBP11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 MARC1Q5VT66 337 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 POTEHQ6S545 545 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 SPATA31D4Q6ZUB0 917 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 PIWIL4Q7Z3Z4 852 aaKnown RBP11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 TMEM151AQ8N4L1 468 aa11.06□□□□□ -0.64
SH3RF1-203ENST00000508685 PDZD8Q8NEN9 1154 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms