RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 LHCGRP22888 699 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 HTR1BP28222 390 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 HSPA9P38646 679 aaKnown RBP14.32□□□□□ -0.12
RAB28-205ENST00000508274 GARSP41250 739 aaKnown RBP14.32□□□□□ -0.12
RAB28-205ENST00000508274 POLR2LP62875 67 aaKnown RBP14.32□□□□□ -0.12
RAB28-205ENST00000508274 ACOX1Q15067 660 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 MARC1Q5VT66 337 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 DENND2CQ68D51 928 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 H2AFVQ71UI9 128 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 RNF214Q8ND24 703 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 OR8K1Q8NGG5 319 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 CTNNBL1Q8WYA6 563 aaPredicted RBP14.32□□□□□ -0.12
RAB28-205ENST00000508274 OR1E3Q8WZA6 343 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 SPOCK2Q92563 424 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 WDR92Q96MX6 357 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 LGR4Q9BXB1 951 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 DEF6Q9H4E7 631 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 FGF22Q9HCT0 170 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 UVRAGQ9P2Y5 699 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 DOLKQ9UPQ8 538 aa14.32□□□□□ -0.12
RAB28-205ENST00000508274 ARHGEF17Q96PE2 2063 aaPredicted RBP14.32□□□□□ -0.12
RAB28-205ENST00000508274 SMG1Q96Q15 3661 aaKnown RBP14.32□□□□□ -0.12
RAB28-205ENST00000508274 NPIPB15A6NHN6 443 aaPredicted RBP14.31□□□□□ -0.12
RAB28-205ENST00000508274 MPOP05164 745 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 CTSEP14091 401 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 ITPKBP27987 946 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 VIPR1P32241 457 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 BLKP51451 505 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 GALNT2Q10471 571 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 TRIM14Q14142 442 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 IHHQ14623 411 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 PAFAH1B3Q15102 231 aaKnown RBP14.31□□□□□ -0.12
RAB28-205ENST00000508274 ELOCQ15369 112 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 ANKRD20A8PQ5CZ79 823 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 TSPAN33Q86UF1 283 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 PDZD3Q86UT5 571 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 BBS5Q8N3I7 341 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.31□□□□□ -0.12
RAB28-205ENST00000508274 KYQ8NBH2 561 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 KCTD6Q8NC69 237 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 NSMCE1Q8WV22 266 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 COQ10AQ96MF6 247 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 DEPDC7Q96QD5 511 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 SMIM14Q96QK8 99 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 CHP1Q99653 195 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 TSPY26PQ9H489 355 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 SPTLC3Q9NUV7 552 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 NCKIPSDQ9NZQ3 722 aa14.31□□□□□ -0.12
RAB28-205ENST00000508274 SSU72P8A0A1W2PR75 194 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 CBFA2T2O43439 604 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 USP12O75317 370 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 HEXIM1O94992 359 aaKnown RBP14.3□□□□□ -0.12
RAB28-205ENST00000508274 PGLSO95336 258 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 PDHA1P08559 390 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 ALPIP09923 528 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 CTPS1P17812 591 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 EIF2S3P41091 472 aaKnown RBP14.3□□□□□ -0.12
RAB28-205ENST00000508274 KIAA1024LP59773 190 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 GBE1Q04446 702 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 SKOR2Q2VWA4 1001 aaPredicted RBP14.3□□□□□ -0.12
RAB28-205ENST00000508274 FAM182AQ5T1J6 154 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 ESRP1Q6NXG1 681 aaKnown RBP14.3□□□□□ -0.12
RAB28-205ENST00000508274 HSD11B1LQ7Z5J1 315 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 VSTM4Q8IW00 320 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 FSTL5Q8N475 847 aaPredicted RBP14.3□□□□□ -0.12
RAB28-205ENST00000508274 TEX26Q8N6G2 289 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 PQLC3Q8N755 202 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 OR56A4Q8NGH8 313 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 NUS1Q96E22 293 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 SEMA3CQ99985 751 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 ZNF670Q9BS34 389 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 ABHD10Q9NUJ1 306 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 GULP1Q9UBP9 304 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 RABGEF1Q9UJ41 708 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 TTLL3Q9Y4R7 772 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 IGSF10Q6WRI0 2623 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 A0A1W2PNU3 283 aaPredicted RBP14.3□□□□□ -0.12
RAB28-205ENST00000508274 CACNB4O00305 520 aaPredicted RBP14.3□□□□□ -0.12
RAB28-205ENST00000508274 AKR1B10O60218 316 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 MFAP3LO75121 409 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 TMEM253P0C7T8 217 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 TRIM23P36406 574 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 ETV3P41162 512 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 DSC2Q02487 901 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 SLC10A2Q12908 348 aaPredicted RBP14.3□□□□□ -0.12
RAB28-205ENST00000508274 MESDQ14696 234 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 ISXQ2M1V0 245 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 PNCKQ6P2M8 343 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 SFTPA2Q8IWL1 248 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 ARL10Q8N8L6 244 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 PIH1D2Q8WWB5 315 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 RAPGEF5Q92565 580 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 MAML1Q92585 1016 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 GLMNQ92990 594 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 FAF2Q96CS3 445 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 RBM15Q96T37 977 aaKnown RBP eCLIP14.3□□□□□ -0.12
RAB28-205ENST00000508274 CCDC3Q9BQI4 270 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 WDR26Q9H7D7 661 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 SYNDIG1Q9H7V2 258 aa14.3□□□□□ -0.12
RAB28-205ENST00000508274 PADI4Q9UM07 663 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms