RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 ASB14A6NK59 587 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 SUPT3HO75486 399 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 HLA-DQB2P05538 268 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 PSMD7P51665 324 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 SLC36A3Q495N2 470 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 XKR5Q6UX68 686 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 TMEM26Q6ZUK4 368 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 MOB2Q70IA6 237 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 FASTKD5Q7L8L6 764 aaKnown RBP13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 CHST15Q7LFX5 561 aaPredicted RBP13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 SLC15A3Q8IY34 581 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 LRRC43Q8N309 656 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 ATPAF2Q8N5M1 289 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 TOP6BLQ8N6T0 577 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 EXT2Q93063 718 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 PPP1R14BQ96C90 147 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 NDFIP2Q9NV92 336 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 CMTM6Q9NX76 183 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 NEU3Q9UQ49 428 aa13.47□□□□□ -0.25
SNCAIP-209ENST00000508017 MIA3Q5JRA6 1907 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 FXYD1O00168 92 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 CCL22O00626 93 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 GIPC1O14908 333 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 ANXA9O76027 345 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 YAP1P46937 504 aaKnown RBP13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 ACADVLP49748 655 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 APLP1P51693 650 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 STX1BP61266 288 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 TNK2Q07912 1038 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 GRB7Q14451 532 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 RAB39AQ14964 217 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 FGD3Q5JSP0 725 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 AARS2Q5JTZ9 985 aaKnown RBP13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 IRAK1BP1Q5VVH5 260 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 PM20D1Q6GTS8 502 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 KIAA0930Q6ICG6 404 aaPredicted RBP13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 PIM3Q86V86 326 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 ADGRG5Q8IZF4 528 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 TNIP2Q8NFZ5 429 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 ADAMTS16Q8TE57 1224 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 RNF34Q969K3 372 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 ZUFSPQ96AP4 578 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 ROPN1LQ96C74 230 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 CCDC126Q96EE4 140 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 PGAP3Q96FM1 320 aaPredicted RBP13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 MRGPRX2Q96LB1 330 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 FSD1LQ9BXM9 530 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 PAIP1Q9H074 479 aaKnown RBP13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 GPRC5DQ9NZD1 345 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 CDH7Q9ULB5 785 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 PPP2R3BQ9Y5P8 575 aa13.46□□□□□ -0.25
SNCAIP-209ENST00000508017 TRIM64A6NGJ6 449 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 LRRC14BA6NHZ5 514 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 EI24O14681 340 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 ACOX3O15254 700 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 MTHFD1P11586 935 aaKnown RBP13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 KCNE1P15382 129 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 MAPK10P53779 464 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 CDKN2DP55273 166 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 ATP6AP1Q15904 470 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 UGT3A2Q3SY77 523 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 UNC50Q53HI1 259 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 GPR158Q5T848 1215 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 HECTD2Q5U5R9 776 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 PACRGLQ8N7B6 248 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 PCYOX1LQ8NBM8 494 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 PCED1BQ96HM7 432 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 IL12RB2Q99665 862 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 POLR1BQ9H9Y6 1135 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 CNGB3Q9NQW8 809 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 MRGBPQ9NV56 204 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 SLC38A7Q9NVC3 462 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 TBCCD1Q9NVR7 557 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 ABCD2Q9UBJ2 740 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 ANKRD12Q6UB98 2062 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 BRCA1P38398 1863 aaKnown RBP13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 ADM5C9JUS6 153 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 CLOCKO15516 846 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 MAFKO60675 156 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 DARSP14868 501 aaKnown RBP13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 PAMP19021 973 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 IMPDH1P20839 514 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 CCNCP24863 283 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 FASP25445 335 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 CCT8P50990 548 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 CCR3P51677 355 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 FOXA1P55317 472 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 ATP6V0D1P61421 351 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 ZNF678Q5SXM1 525 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 UBXN11Q5T124 520 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 DCLRE1AQ6PJP8 1040 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 TBC1D15Q8TC07 691 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 THAP11Q96EK4 314 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 UBXN10Q96LJ8 280 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 ZFP42Q96MM3 310 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 KCNA7Q96RP8 456 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 SLC39A8Q9C0K1 460 aa13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 PTBP2Q9UKA9 531 aaKnown RBP13.45□□□□□ -0.26
SNCAIP-209ENST00000508017 DNAJC15Q9Y5T4 150 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms