RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 F5H5T6 163 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 PRAMEF11O60813 436 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 ATP6AP2O75787 350 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 SEC24AO95486 1093 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 COL6A2P12110 1019 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 HOXD9P28356 352 aaPredicted RBP14.54□□□□□ -0.08
DDX41-208ENST00000507955 CDKN1CP49918 316 aaPredicted RBP14.54□□□□□ -0.08
DDX41-208ENST00000507955 AQP4P55087 323 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 CDH13P55290 713 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 C1QTNF8P60827 252 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 FAM117BQ6P1L5 589 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 AAGABQ6PD74 315 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 LINGO4Q6UY18 593 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.54□□□□□ -0.08
DDX41-208ENST00000507955 CCDC117Q8IWD4 279 aaPredicted RBP14.54□□□□□ -0.08
DDX41-208ENST00000507955 SPPL2BQ8TCT7 592 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 TRAPPC9Q96Q05 1148 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 POLR1EQ9GZS1 481 aaKnown RBP14.54□□□□□ -0.08
DDX41-208ENST00000507955 RNF38Q9H0F5 515 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 SMPD4Q9NXE4 827 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 SPO11Q9Y5K1 396 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 ANKRD12Q6UB98 2062 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 UBFD1O14562 309 aaKnown RBP14.54□□□□□ -0.08
DDX41-208ENST00000507955 MYL4P12829 197 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 PKNOX1P55347 436 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 POLE2P56282 527 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 TIAL1Q01085 375 aaKnown RBP eCLIP14.54□□□□□ -0.08
DDX41-208ENST00000507955 FAM83EQ2M2I3 478 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 FSCBQ5H9T9 825 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 FAM126BQ8IXS8 530 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 PTERQ96BW5 349 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 RCN3Q96D15 328 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 PRICKLE1Q96MT3 831 aaPredicted RBP14.54□□□□□ -0.08
DDX41-208ENST00000507955 FAM96AQ9H5X1 160 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 NCKIPSDQ9NZQ3 722 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 PDP2Q9P2J9 529 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 UNC80Q8N2C7 3258 aa14.54□□□□□ -0.08
DDX41-208ENST00000507955 C2orf78A6NCI8 922 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 H3BNX3 289 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 COCHO43405 550 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 LTA4HP09960 611 aaKnown RBP14.53□□□□□ -0.08
DDX41-208ENST00000507955 SULT2A1Q06520 285 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 PPP2R3CQ969Q6 453 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 NPAS2Q99743 824 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.53□□□□□ -0.081e-5■■■□□ 18
DDX41-208ENST00000507955 PDFQ9HBH1 243 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 OLA1Q9NTK5 396 aaKnown RBP14.53□□□□□ -0.08
DDX41-208ENST00000507955 MID2Q9UJV3 735 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 ARHGAP26Q9UNA1 814 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 CDYLQ9Y232 598 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 PCDHGC4Q9Y5F7 938 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 COPG1Q9Y678 874 aaKnown RBP14.53□□□□□ -0.08
DDX41-208ENST00000507955 A0A087X1B8 175 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 CBX4O00257 560 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 GPR39O43194 453 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 H2AFYO75367 372 aaKnown RBP14.53□□□□□ -0.08
DDX41-208ENST00000507955 SIX3O95343 332 aaPredicted RBP14.53□□□□□ -0.08
DDX41-208ENST00000507955 ZDHHC11BP0C7U3 371 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 ATP5F1P24539 256 aaPredicted RBP14.53□□□□□ -0.08
DDX41-208ENST00000507955 ATP5C1P36542 298 aaKnown RBP14.53□□□□□ -0.08
DDX41-208ENST00000507955 DPP6P42658 865 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 HTRA3P83110 453 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 PARP15Q460N3 678 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 FAM156AQ8NDB6 213 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 PDCD6IPQ8WUM4 868 aaKnown RBP14.53□□□□□ -0.08
DDX41-208ENST00000507955 TADA1Q96BN2 335 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 UBXN10Q96LJ8 280 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.53□□□□□ -0.08
DDX41-208ENST00000507955 FAM50BQ9Y247 325 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 PTGDR2Q9Y5Y4 395 aa14.53□□□□□ -0.08
DDX41-208ENST00000507955 KIF3CO14782 793 aa14.52□□□□□ -0.08
DDX41-208ENST00000507955 CD3EAPO15446 510 aaKnown RBP14.52□□□□□ -0.08
DDX41-208ENST00000507955 ACSL4O60488 711 aa14.52□□□□□ -0.08
DDX41-208ENST00000507955 IPO13O94829 963 aaKnown RBP14.52□□□□□ -0.08
DDX41-208ENST00000507955 ENO3P13929 434 aaPredicted RBP14.52□□□□□ -0.08
DDX41-208ENST00000507955 RAG1P15918 1043 aa14.52□□□□□ -0.08
DDX41-208ENST00000507955 TCN1P20061 433 aaPredicted RBP14.52□□□□□ -0.08
DDX41-208ENST00000507955 HOXD10P28358 340 aa14.52□□□□□ -0.08
DDX41-208ENST00000507955 GRIA2P42262 883 aa14.52□□□□□ -0.08
DDX41-208ENST00000507955 ROR2Q01974 943 aaKnown RBP14.52□□□□□ -0.08
DDX41-208ENST00000507955 GNA12Q03113 381 aa14.52□□□□□ -0.08
DDX41-208ENST00000507955 DEFB115Q30KQ5 88 aa14.52□□□□□ -0.08
DDX41-208ENST00000507955 ACAD11Q709F0 780 aa14.52□□□□□ -0.08
DDX41-208ENST00000507955 ISCA2Q86U28 154 aa14.52□□□□□ -0.08
DDX41-208ENST00000507955 NPAS4Q8IUM7 802 aa14.52□□□□□ -0.08
DDX41-208ENST00000507955 CRIPAKQ8N1N5 446 aa14.52□□□□□ -0.08
DDX41-208ENST00000507955 GDPD5Q8WTR4 605 aa14.52□□□□□ -0.08
DDX41-208ENST00000507955 AUTS2Q8WXX7 1259 aa14.52□□□□□ -0.08
DDX41-208ENST00000507955 RMDN1Q96DB5 314 aa14.52□□□□□ -0.08
DDX41-208ENST00000507955 GPBP1L1Q9HC44 474 aaPredicted RBP14.52□□□□□ -0.08
DDX41-208ENST00000507955 ZDHHC7Q9NXF8 308 aa14.52□□□□□ -0.08
DDX41-208ENST00000507955 UBA6A0AVT1 1052 aaPredicted RBP14.52□□□□□ -0.09
DDX41-208ENST00000507955 SDHDO14521 159 aa14.52□□□□□ -0.09
DDX41-208ENST00000507955 SLC7A4O43246 635 aa14.52□□□□□ -0.09
DDX41-208ENST00000507955 SUPT7LO94864 414 aa14.52□□□□□ -0.09
DDX41-208ENST00000507955 AGAP9Q5VTM2 703 aa14.52□□□□□ -0.09
DDX41-208ENST00000507955 GK5Q6ZS86 529 aa14.52□□□□□ -0.09
DDX41-208ENST00000507955 KIAA0408Q6ZU52 694 aa14.52□□□□□ -0.09
DDX41-208ENST00000507955 DSELQ8IZU8 1212 aa14.52□□□□□ -0.09
DDX41-208ENST00000507955 FBXW8Q8N3Y1 598 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms