RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 TMEM202A6NGA9 273 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 CASC3O15234 703 aaKnown RBP20.89■□□□□ 0.93
CLDND1-216ENST00000507944 HTRA2O43464 458 aaPredicted RBP20.89■□□□□ 0.93
CLDND1-216ENST00000507944 SOCS5O75159 536 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 CYP1A2P05177 515 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 HOXC4P09017 264 aaPredicted RBP20.89■□□□□ 0.93
CLDND1-216ENST00000507944 FAM228BP0C875 321 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 GM2AP17900 193 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 TRIM23P36406 574 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 SLC25A11Q02978 314 aaKnown RBP20.89■□□□□ 0.93
CLDND1-216ENST00000507944 TLE3Q04726 772 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 C3orf38Q5JPI3 329 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 KCTD16Q68DU8 428 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 PGBD5Q8N414 524 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 ATPAF2Q8N5M1 289 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 KYQ8NBH2 561 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 OR56A4Q8NGH8 313 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 PDCD6IPQ8WUM4 868 aaKnown RBP20.89■□□□□ 0.93
CLDND1-216ENST00000507944 NSMCE1Q8WV22 266 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 OR1E3Q8WZA6 343 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 SPOCK2Q92563 424 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 IQCDQ96DY2 449 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 NAF1Q96HR8 494 aaKnown RBP20.89■□□□□ 0.93
CLDND1-216ENST00000507944 RBM15Q96T37 977 aaKnown RBP eCLIP20.89■□□□□ 0.93
CLDND1-216ENST00000507944 LGMNQ99538 433 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 NOD2Q9HC29 1040 aa20.89■□□□□ 0.93
CLDND1-216ENST00000507944 LUC7L2Q9Y383 392 aaKnown RBP20.89■□□□□ 0.93
CLDND1-216ENST00000507944 A0A1W2PNU3 283 aaPredicted RBP20.88■□□□□ 0.93
CLDND1-216ENST00000507944 GOLGA6L19H0YKK7 550 aa20.88■□□□□ 0.93
CLDND1-216ENST00000507944 MYO1FO00160 1098 aa20.88■□□□□ 0.93
CLDND1-216ENST00000507944 KELP23276 732 aa20.88■□□□□ 0.93
CLDND1-216ENST00000507944 SERPINB6P35237 376 aa20.88■□□□□ 0.93
CLDND1-216ENST00000507944 SPIDRQ14159 915 aa20.88■□□□□ 0.93
CLDND1-216ENST00000507944 KRT81Q14533 505 aa20.88■□□□□ 0.93
CLDND1-216ENST00000507944 ALKBH5Q6P6C2 394 aaKnown RBP20.88■□□□□ 0.93
CLDND1-216ENST00000507944 MGME1Q9BQP7 344 aa20.88■□□□□ 0.93
CLDND1-216ENST00000507944 SYNDIG1Q9H7V2 258 aa20.88■□□□□ 0.93
CLDND1-216ENST00000507944 FGF22Q9HCT0 170 aa20.88■□□□□ 0.93
CLDND1-216ENST00000507944 ASCL3Q9NQ33 180 aa20.88■□□□□ 0.93
CLDND1-216ENST00000507944 LOC400499M0QZD8 3231 aa20.88■□□□□ 0.93
CLDND1-216ENST00000507944 EIF4E1BA6NMX2 242 aaKnown RBP20.87■□□□□ 0.93
CLDND1-216ENST00000507944 TNFRSF10CO14798 259 aa20.87■□□□□ 0.93
CLDND1-216ENST00000507944 RBMS1P29558 406 aaKnown RBP20.87■□□□□ 0.93
CLDND1-216ENST00000507944 SSR1P43307 286 aaKnown RBP20.87■□□□□ 0.93
CLDND1-216ENST00000507944 CDH6P55285 790 aa20.87■□□□□ 0.93
CLDND1-216ENST00000507944 MAXP61244 160 aa20.87■□□□□ 0.93
CLDND1-216ENST00000507944 RALGPS1Q5JS13 557 aa20.87■□□□□ 0.93
CLDND1-216ENST00000507944 CCDC122Q5T0U0 273 aa20.87■□□□□ 0.93
CLDND1-216ENST00000507944 MARC1Q5VT66 337 aa20.87■□□□□ 0.93
CLDND1-216ENST00000507944 PNCKQ6P2M8 343 aa20.87■□□□□ 0.93
CLDND1-216ENST00000507944 IGF2-ASQ6U949 168 aa20.87■□□□□ 0.93
CLDND1-216ENST00000507944 CCDC74AQ96AQ1 378 aa20.87■□□□□ 0.93
CLDND1-216ENST00000507944 COQ10AQ96MF6 247 aa20.87■□□□□ 0.93
CLDND1-216ENST00000507944 FCRL3Q96P31 734 aaPredicted RBP20.87■□□□□ 0.93
CLDND1-216ENST00000507944 UBL7Q96S82 380 aaPredicted RBP20.87■□□□□ 0.93
CLDND1-216ENST00000507944 LGR4Q9BXB1 951 aa20.87■□□□□ 0.93
CLDND1-216ENST00000507944 MRPL40Q9NQ50 206 aaKnown RBP20.87■□□□□ 0.93
CLDND1-216ENST00000507944 THSD1Q9NS62 852 aa20.87■□□□□ 0.93
CLDND1-216ENST00000507944 PHTF1Q9UMS5 762 aa20.87■□□□□ 0.93
CLDND1-216ENST00000507944 NTN3O00634 580 aaPredicted RBP20.86■□□□□ 0.93
CLDND1-216ENST00000507944 CPP00450 1065 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 IL4RP24394 825 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 NFKBIAP25963 317 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 VIPR1P32241 457 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 MMP13P45452 471 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 TRAF2Q12933 501 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 CNGA3Q16281 694 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 HADHQ16836 314 aaKnown RBP20.86■□□□□ 0.93
CLDND1-216ENST00000507944 TAF8Q7Z7C8 310 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 LRRC49Q8IUZ0 686 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 PELI3Q8N2H9 469 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 OR6C4Q8NGE1 309 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 SLC46A1Q96NT5 459 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 WDR26Q9H7D7 661 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 IFNKQ9P0W0 207 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 RCOR3Q9P2K3 495 aaPredicted RBP20.86■□□□□ 0.93
CLDND1-216ENST00000507944 RABGEF1Q9UJ41 708 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 MOSPD1Q9UJG1 213 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 PCDHGA8Q9Y5G5 932 aa20.86■□□□□ 0.93
CLDND1-216ENST00000507944 SMG1Q96Q15 3661 aaKnown RBP20.86■□□□□ 0.93
CLDND1-216ENST00000507944 AHCTF1Q8WYP5 2266 aa20.85■□□□□ 0.93
CLDND1-216ENST00000507944 PDE2AO00408 941 aaPredicted RBP20.85■□□□□ 0.93
CLDND1-216ENST00000507944 HEXIM1O94992 359 aaKnown RBP20.85■□□□□ 0.93
CLDND1-216ENST00000507944 GYPCP04921 128 aa20.85■□□□□ 0.93
CLDND1-216ENST00000507944 CYP2A6P11509 494 aaPredicted RBP20.85■□□□□ 0.93
CLDND1-216ENST00000507944 PDX1P52945 283 aa20.85■□□□□ 0.93
CLDND1-216ENST00000507944 MMRN1Q13201 1228 aa20.85■□□□□ 0.93
CLDND1-216ENST00000507944 DENND2CQ68D51 928 aa20.85■□□□□ 0.93
CLDND1-216ENST00000507944 GPR155Q7Z3F1 870 aa20.85■□□□□ 0.93
CLDND1-216ENST00000507944 CBARPQ8N350 705 aaPredicted RBP20.85■□□□□ 0.93
CLDND1-216ENST00000507944 FAM46DQ8NEK8 389 aa20.85■□□□□ 0.93
CLDND1-216ENST00000507944 GPR156Q8NFN8 814 aa20.85■□□□□ 0.93
CLDND1-216ENST00000507944 WDR36Q8NI36 951 aaKnown RBP20.85■□□□□ 0.93
CLDND1-216ENST00000507944 FAM71BQ8TC56 605 aa20.85■□□□□ 0.93
CLDND1-216ENST00000507944 NUS1Q96E22 293 aa20.85■□□□□ 0.93
CLDND1-216ENST00000507944 PRR11Q96HE9 360 aaPredicted RBP20.85■□□□□ 0.93
CLDND1-216ENST00000507944 TMEM168Q9H0V1 697 aa20.85■□□□□ 0.93
CLDND1-216ENST00000507944 CYP4F12Q9HCS2 524 aa20.85■□□□□ 0.93
CLDND1-216ENST00000507944 KCTD5Q9NXV2 234 aa20.85■□□□□ 0.93
CLDND1-216ENST00000507944 PGLSO95336 258 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms