RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 CDH8P55286 799 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 NLRP5P59047 1200 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 PPATQ06203 517 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 AIMP2Q13155 320 aaKnown RBP4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 NAE1Q13564 534 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 ACVR2BQ13705 512 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 TOMM20Q15388 145 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 ZNF284Q2VY69 593 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 ZSCAN23Q3MJ62 389 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 DUSP28Q4G0W2 176 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 C11orf87Q6NUJ2 197 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 GLDNQ6ZMI3 551 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 QSOX2Q6ZRP7 698 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 Q6ZSV7 163 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 TEX11Q8IYF3 940 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 SRBD1Q8N5C6 995 aaKnown RBP4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 NRACQ8N912 160 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 SCCPDHQ8NBX0 429 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 C1orf131Q8NDD1 294 aaKnown RBP4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 URB1-AS1Q96HZ7 61 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 SLC41A2Q96JW4 573 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 TMEM47Q9BQJ4 181 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 C1QTNF5Q9BXJ0 243 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 SLC29A3Q9BZD2 475 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 GPR108Q9NPR9 543 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 DDX4Q9NQI0 724 aaKnown RBP4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 TMEM51Q9NW97 253 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 CISD1Q9NZ45 108 aaKnown RBP4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 IL36RNQ9UBH0 155 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 ERVK-11Q9UQG0 969 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 SESN1Q9Y6P5 492 aa4.17□□□□□ -1.74
HMGB1P28-201ENST00000507778 FAM90A8PA6NJQ4 464 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 BECN2A8MW95 431 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 A8MZ25 164 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 BTBD18B2RXH4 712 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 AKR1B15C9JRZ8 316 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 VWA5AO00534 786 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 ASAP2O43150 1006 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 HCRTR2O43614 444 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 OR2C1O95371 312 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 CLTBP09497 229 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 FAM90A13PP0C7W8 464 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 FAM90A24PP0C7X0 464 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 CSH1P0DML2 217 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 CSH2P0DML3 217 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 PSG1P11464 419 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 TMEM11P17152 192 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 ACTN2P35609 894 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 GARSP41250 739 aaKnown RBP4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 PIK3CAP42336 1068 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 PMS2P54278 862 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 TRAF1Q13077 416 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 MYBPC2Q14324 1141 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 KCTD2Q14681 263 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 TWIST1Q15672 202 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 NAB2Q15742 525 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 C2orf68Q2NKX9 166 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 ODF3L2Q3SX64 289 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 DNTTIP2Q5QJE6 756 aaKnown RBP4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 PLEKHS1Q5SXH7 462 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 PLEKHA7Q6IQ23 1121 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 C16orf54Q6UWD8 224 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 SZRD1Q7Z422 152 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 CCDC13Q8IYE1 715 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 TAGAPQ8N103 731 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 NME8Q8N427 588 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 MIGA1Q8NAN2 632 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 AGBL3Q8NEM8 1001 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 ARRDC2Q8TBH0 407 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 TRIB2Q92519 343 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 ZKSCAN4Q969J2 545 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 ERGIC1Q969X5 290 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 CALML4Q96GE6 196 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 PGAM5Q96HS1 289 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 HARBI1Q96MB7 349 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 MAK16Q9BXY0 300 aaKnown RBP4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 IFIH1Q9BYX4 1025 aaKnown RBP4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 PDZD7Q9H5P4 517 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 CLK4Q9HAZ1 481 aaKnown RBP4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 PLAC1Q9HBJ0 212 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 OR6C3Q9NZP0 311 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 PAM16Q9Y3D7 125 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 MAU2Q9Y6X3 613 aa4.16□□□□□ -1.74
HMGB1P28-201ENST00000507778 H3BNX3 289 aa4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 FIBPO43427 364 aa4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 SPRY3O43610 288 aa4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 AHCYL1O43865 530 aa4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 LCATP04180 440 aa4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 CENPBP07199 599 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 PIGAP37287 484 aa4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 NR4A2P43354 598 aa4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 RFX5P48382 616 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 EPS8Q12929 822 aa4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 ADIPOQQ15848 244 aa4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 FSCBQ5H9T9 825 aa4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 FNBP1LQ5T0N5 605 aa4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 CFAP58Q5T655 872 aa4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 HIST2H2BCQ6DN03 193 aa4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 HIST2H2BDQ6DRA6 164 aa4.15□□□□□ -1.75
HMGB1P28-201ENST00000507778 JADE1Q6IE81 842 aa4.15□□□□□ -1.75
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