RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 PPP1R2P41236 205 aa13.94□□□□□ -0.18
DDR1-260ENST00000507533 CACNA1DQ01668 2161 aa13.94□□□□□ -0.18
DDR1-260ENST00000507533 TSR1Q2NL82 804 aaKnown RBP13.94□□□□□ -0.18
DDR1-260ENST00000507533 PTPN20Q4JDL3 420 aa13.94□□□□□ -0.18
DDR1-260ENST00000507533 ERAP2Q6P179 960 aa13.94□□□□□ -0.18
DDR1-260ENST00000507533 MAMDC2Q7Z304 686 aaPredicted RBP13.94□□□□□ -0.18
DDR1-260ENST00000507533 TICAM1Q8IUC6 712 aa13.94□□□□□ -0.18
DDR1-260ENST00000507533 FAM114A1Q8IWE2 563 aa13.94□□□□□ -0.18
DDR1-260ENST00000507533 BMPERQ8N8U9 685 aa13.94□□□□□ -0.18
DDR1-260ENST00000507533 NETO2Q8NC67 525 aa13.94□□□□□ -0.18
DDR1-260ENST00000507533 PHF12Q96QT6 1004 aa13.94□□□□□ -0.18
DDR1-260ENST00000507533 DPYSL5Q9BPU6 564 aa13.94□□□□□ -0.18
DDR1-260ENST00000507533 MAGEH1Q9H213 219 aa13.94□□□□□ -0.18
DDR1-260ENST00000507533 PCDHGC3Q9UN70 934 aa13.94□□□□□ -0.18
DDR1-260ENST00000507533 MFHAS1Q9Y4C4 1052 aa13.94□□□□□ -0.18
DDR1-260ENST00000507533 LRP4O75096 1905 aa13.94□□□□□ -0.18
DDR1-260ENST00000507533 IGHV1OR21-1A0A087WYE8 117 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 BECN2A8MW95 431 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 INSIG1O15503 277 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 BUB1O43683 1085 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 KDELR3O43731 214 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 HOXC4P09017 264 aaPredicted RBP13.93□□□□□ -0.18
DDR1-260ENST00000507533 BMP6P22004 513 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 ELAVL4P26378 380 aaKnown RBP13.93□□□□□ -0.18
DDR1-260ENST00000507533 CSF2RBP32927 897 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 STAT1P42224 750 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 MAPKAPK2P49137 400 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 RHOAP61586 193 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 SQSTM1Q13501 440 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 STIM1Q13586 685 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 UGP2Q16851 508 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 RWDD4Q6NW29 188 aaKnown RBP13.93□□□□□ -0.18
DDR1-260ENST00000507533 TMEM71Q6P5X7 295 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 ENOSF1Q7L5Y1 443 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 NRROSQ86YC3 692 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 ZDHHC17Q8IUH5 632 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 HCAR2Q8TDS4 363 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 DHTKD1Q96HY7 919 aaPredicted RBP13.93□□□□□ -0.18
DDR1-260ENST00000507533 NCAPGQ9BPX3 1015 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 LGR4Q9BXB1 951 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 GSDMCQ9BYG8 508 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 TRIT1Q9H3H1 467 aaKnown RBP13.93□□□□□ -0.18
DDR1-260ENST00000507533 SUDS3Q9H7L9 328 aaPredicted RBP13.93□□□□□ -0.18
DDR1-260ENST00000507533 TAAR2Q9P1P5 351 aa13.93□□□□□ -0.18
DDR1-260ENST00000507533 MRPS18BQ9Y676 258 aaKnown RBP13.93□□□□□ -0.18
DDR1-260ENST00000507533 PRSS38A1L453 326 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 ZSCAN5CA6NGD5 496 aaPredicted RBP13.92□□□□□ -0.18
DDR1-260ENST00000507533 PPP1R3GB7ZBB8 358 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 PSMA7O14818 248 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 PPM1DO15297 605 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 RAMP2O60895 175 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 STK17BO94768 372 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 PIGNO95427 931 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 CD44P16070 742 aaKnown RBP13.92□□□□□ -0.18
DDR1-260ENST00000507533 RHOQP17081 205 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 MAN1A1P33908 653 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 MMP12P39900 470 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 MC2RQ01718 297 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 GJB7Q6PEY0 223 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 CEACAM20Q6UY09 585 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 NLRP14Q86W24 1093 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 FAM131BQ86XD5 332 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 ZNF354CQ86Y25 554 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 PATE1Q8WXA2 126 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 ZPBPQ9BS86 351 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 ZMYND15Q9H091 742 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 SUV39H2Q9H5I1 410 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 CARS2Q9HA77 564 aaKnown RBP13.92□□□□□ -0.18
DDR1-260ENST00000507533 CASS4Q9NQ75 786 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 TLK1Q9UKI8 766 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 TMEM184BQ9Y519 407 aaPredicted RBP13.92□□□□□ -0.18
DDR1-260ENST00000507533 PCDHB3Q9Y5E6 796 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 CSMD1Q96PZ7 3565 aa13.92□□□□□ -0.18
DDR1-260ENST00000507533 DOPEY1Q5JWR5 2465 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 CHD5Q8TDI0 1954 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 TSPAN11A1L157 253 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 A8MU76 341 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 TEX33O43247 280 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 RFPL1O75677 317 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 RECQL5O94762 991 aaPredicted RBP13.91□□□□□ -0.18
DDR1-260ENST00000507533 CLDN1O95832 211 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 KRT9P35527 623 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 TRIM23P36406 574 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 STAT5AP42229 794 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 PPM1FP49593 454 aaPredicted RBP13.91□□□□□ -0.18
DDR1-260ENST00000507533 ILF3Q12906 894 aaKnown RBP eCLIP13.91□□□□□ -0.18
DDR1-260ENST00000507533 SNAP47Q5SQN1 464 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 FAM102AQ5T9C2 384 aaPredicted RBP13.91□□□□□ -0.18
DDR1-260ENST00000507533 SRRM1Q8IYB3 904 aaKnown RBP13.91□□□□□ -0.18
DDR1-260ENST00000507533 CASKIN2Q8WXE0 1202 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 RETREG1Q9H6L5 497 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 WDR26Q9H7D7 661 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 PLCB1Q9NQ66 1216 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 TMEM248Q9NWD8 314 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 OR12D3Q9UGF7 316 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 POLHQ9Y253 713 aa13.91□□□□□ -0.18
DDR1-260ENST00000507533 CFAP69A5D8W1 941 aa13.9□□□□□ -0.18
DDR1-260ENST00000507533 PDE2AO00408 941 aaPredicted RBP13.9□□□□□ -0.18
DDR1-260ENST00000507533 PDGFAP04085 211 aa13.9□□□□□ -0.18
DDR1-260ENST00000507533 F8A1P23610 371 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms