RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 COMTD1Q86VU5 262 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 RASGRP3Q8IV61 690 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 RHOT1Q8IXI2 618 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 VGLL2Q8N8G2 317 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 NIPA2Q8N8Q9 360 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 GLIS1Q8NBF1 620 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 B3GALNT2Q8NCR0 500 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 NSUN7Q8NE18 718 aaKnown RBP3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 TRIM58Q8NG06 486 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 LINS1Q8NG48 757 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 B4GALNT2Q8NHY0 566 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 KCNG4Q8TDN1 519 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 TNPO1Q92973 898 aaKnown RBP3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 KAT5Q92993 513 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 FAM149B1Q96BN6 582 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 TRIM43Q96BQ3 446 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 HDAC11Q96DB2 347 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 LRRC39Q96DD0 335 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 TMX3Q96JJ7 454 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 CLPTM1LQ96KA5 538 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 CMTM3Q96MX0 182 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 CATSPER2Q96P56 530 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 CD180Q99467 661 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 RAD9AQ99638 391 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 CCT7Q99832 543 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 SIKE1Q9BRV8 207 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 SLC25A23Q9BV35 468 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 TPPP3Q9BW30 176 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 CARD6Q9BX69 1037 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 HEMGNQ9BXL5 484 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 CAPS2Q9BXY5 557 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 VCX3BQ9H321 246 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 HAUS4Q9H6D7 363 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 G6PC2Q9NQR9 355 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 SERINC1Q9NRX5 453 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 FARSBQ9NSD9 589 aaKnown RBP3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 ALKBH4Q9NXW9 302 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 NINJ2Q9NZG7 142 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 IL1RAPL1Q9NZN1 696 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 COL20A1Q9P218 1284 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 VPS18Q9P253 973 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 CFAP97Q9P2B7 532 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 IGSF9Q9P2J2 1179 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 ITGA11Q9UKX5 1188 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 CDH7Q9ULB5 785 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 AGAP1Q9UPQ3 857 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 COPG1Q9Y678 874 aaKnown RBP3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 KCNE2Q9Y6J6 123 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 RNF123Q5XPI4 1314 aa3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 ZNF644Q9H582 1327 aaPredicted RBP3.68□□□□□ -1.82
HMGB3P15-201ENST00000507326 TCRBV21S2A2A0A5A6 115 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 A4D1N5 150 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 VWA3AA6NCI4 1184 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 OOEPA6NGQ2 149 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 ACOD1A6NK06 481 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 LIPT2A6NK58 231 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 VGLL3A8MV65 326 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 ZNF879B4DU55 563 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 EIF3CLB5ME19 914 aaKnown RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 F8VZ95 297 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 H0YHG0 523 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 GOLGA8SH3BPF8 625 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 DNM1LO00429 736 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 BTN3A1O00481 513 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 CTDSP2O14595 271 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 TP73O15350 636 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 ADAM20O43506 726 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 CCNT2O60583 730 aaKnown RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 TADA2AO75478 443 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 CRTAPO75718 401 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 SUN1O94901 812 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 PDE8BO95263 885 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 TUBB4AP04350 444 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 EIF2S1P05198 315 aaKnown RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 GNAI3P08754 354 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 ZNF3P17036 446 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 EGR1P18146 543 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 PSMA5P28066 241 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 EPHA8P29322 1005 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 SERPINA4P29622 427 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 TM4SF1P30408 202 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 HOXC8P31273 242 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 IL15P40933 162 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 CPA2P48052 419 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 ANXA11P50995 505 aaKnown RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 RAB28P51157 221 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 HNRNPMP52272 730 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 CASP9P55211 416 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 KIAA1024LP59773 190 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 GNAI1P63096 354 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 TPM4P67936 248 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 POU6F2P78424 691 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 DNAJC3Q13217 504 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 SCGB2A2Q13296 93 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 CUL1Q13616 776 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 TSTA3Q13630 321 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 SNTB1Q13884 538 aaKnown RBP3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 DPYSQ14117 519 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 DOC2AQ14183 400 aa3.67□□□□□ -1.82
HMGB3P15-201ENST00000507326 GAMTQ14353 236 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms