RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 CLN3Q13286 438 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 ZNF235Q14590 738 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 LBRQ14739 615 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 ACOX1Q15067 660 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 SMTNL2Q2TAL5 461 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 FILIP1LQ4L180 1135 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 TAF8Q7Z7C8 310 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 CCNJLQ8IV13 435 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 SFTPA2Q8IWL1 248 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 PELI3Q8N2H9 469 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 ZNF843Q8N446 348 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 GPR156Q8NFN8 814 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 PSKH2Q96QS6 385 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 FOXP3Q9BZS1 431 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 LRRN3Q9H3W5 708 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 WDR26Q9H7D7 661 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 ZWILCHQ9H900 591 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 AIPL1Q9NZN9 384 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 TMEM63CQ9P1W3 806 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 B4GALT6Q9UBX8 382 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 MOSPD1Q9UJG1 213 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 SSUH2Q9Y2M2 353 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 BPTFQ12830 3046 aa11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 ZFC3H1O60293 1989 aaKnown RBP11.58□□□□□ -0.56
HMGCS1-204ENST00000507293 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 A0A1W2PQC6 194 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 PLD2O14939 933 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 NOBOXO60393 691 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 ZIC2O95409 532 aaPredicted RBP11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 CPP00450 1065 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 MYBL1P10243 752 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 SKILP12757 684 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 HGFP14210 728 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 TCF4P15884 667 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 AMPD1P23109 780 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 IL1R2P27930 398 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 ARL4AP40617 200 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 EIF3IQ13347 325 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 CNGA3Q16281 694 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 DPYSL2Q16555 572 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 TMCO3Q6UWJ1 677 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 RAB11FIP2Q7L804 512 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 PGBD5Q8N414 524 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 FBXO39Q8N4B4 442 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 LZTR1Q8N653 840 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 Q8N9G6 341 aaPredicted RBP11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 FAM46DQ8NEK8 389 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 OR6C4Q8NGE1 309 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 CCL4L1Q8NHW4 92 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 PDCD6IPQ8WUM4 868 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 HSPH1Q92598 858 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 NUS1Q96E22 293 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 TRIM11Q96F44 468 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 COQ10AQ96MF6 247 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 ZNF599Q96NL3 588 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 BPIFA3Q9BQP9 254 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 LGR4Q9BXB1 951 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 STRADBQ9C0K7 418 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 TMEM168Q9H0V1 697 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 SUDS3Q9H7L9 328 aaPredicted RBP11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 CYP4F12Q9HCS2 524 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 MRPL47Q9HD33 250 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 ATXN7L1Q9ULK2 861 aaPredicted RBP11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 PCDHGC4Q9Y5F7 938 aa11.57□□□□□ -0.56
HMGCS1-204ENST00000507293 A0A1B0GTH6 734 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 PRSS38A1L453 326 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 SMTNL1A8MU46 457 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 TMX2-CTNND1H3BSU7 103 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 K7ENP7 123 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 TNFRSF10CO14798 259 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 HTRA2O43464 458 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 PEX11BO96011 259 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 HOXC4P09017 264 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 MYCLP1P12525 358 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 PLA2G2AP14555 144 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 GLB1P16278 677 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 CR2P20023 1033 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 SLC5A2P31639 672 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 CCKBRP32239 447 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 VIPR1P32241 457 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 UGT1A5P35504 534 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 PCK1P35558 622 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 TRIM23P36406 574 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 MAXP61244 160 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 ZSCAN23Q3MJ62 389 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 C14orf28Q4W4Y0 310 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 CERCAMQ5T4B2 595 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 KIAA1614Q5VZ46 1190 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 DENND2CQ68D51 928 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 SPECC1LQ69YQ0 1117 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 PNCKQ6P2M8 343 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 INO80CQ6PI98 192 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 OGFOD3Q6PK18 319 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 CCDC81Q6ZN84 652 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 SPRED1Q7Z699 444 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 JAMLQ86YT9 394 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 SNRNP27Q8WVK2 155 aaKnown RBP11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 TTC9Q92623 222 aa11.56□□□□□ -0.56
HMGCS1-204ENST00000507293 WBP1Q96G27 269 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms