RNA–Protein interactions for RNA: ENST00000506891.1

TTC39B-205, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-205ENST00000506891 CCDC112Q8NEF3 446 aa12.17□□□□□ -0.46
TTC39B-205ENST00000506891 GLMNQ92990 594 aa12.17□□□□□ -0.46
TTC39B-205ENST00000506891 OLFM3Q96PB7 478 aa12.17□□□□□ -0.46
TTC39B-205ENST00000506891 SRPK1Q96SB4 655 aaKnown RBP12.17□□□□□ -0.46
TTC39B-205ENST00000506891 VAT1Q99536 393 aa12.17□□□□□ -0.46
TTC39B-205ENST00000506891 IL12RB2Q99665 862 aa12.17□□□□□ -0.46
TTC39B-205ENST00000506891 WRAP53Q9BUR4 548 aaKnown RBP12.17□□□□□ -0.46
TTC39B-205ENST00000506891 APOOQ9BUR5 198 aa12.17□□□□□ -0.46
TTC39B-205ENST00000506891 SLC13A1Q9BZW2 595 aa12.17□□□□□ -0.46
TTC39B-205ENST00000506891 NOD2Q9HC29 1040 aa12.17□□□□□ -0.46
TTC39B-205ENST00000506891 KLF15Q9UIH9 416 aa12.17□□□□□ -0.46
TTC39B-205ENST00000506891 GOLGA4Q13439 2230 aaKnown RBP12.17□□□□□ -0.46
TTC39B-205ENST00000506891 TMEM131Q92545 1883 aa12.17□□□□□ -0.46
TTC39B-205ENST00000506891 ANKRD36A6QL64 1941 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 SOWAHDA6NJG2 315 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 SRRM3A6NNA2 597 aaPredicted RBP12.16□□□□□ -0.46
TTC39B-205ENST00000506891 PDE2AO00408 941 aaPredicted RBP12.16□□□□□ -0.46
TTC39B-205ENST00000506891 FZD6O60353 706 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 KRT37O76014 449 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 PGLSO95336 258 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 CPP00450 1065 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 PYGLP06737 847 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 ELFN1P0C7U0 828 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 KELP23276 732 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 CTNNA1P35221 906 aaKnown RBP12.16□□□□□ -0.46
TTC39B-205ENST00000506891 PTPN7P35236 360 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 GJC1P36383 396 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 TRIM23P36406 574 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 RPIAP49247 311 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 GBE1Q04446 702 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 KIF5AQ12840 1032 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 INPP5AQ14642 412 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 LRRC73Q5JTD7 316 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 FAXCQ5TGI0 409 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 ZCCHC8Q6NZY4 707 aaKnown RBP12.16□□□□□ -0.46
TTC39B-205ENST00000506891 DAAM2Q86T65 1068 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 CBARPQ8N350 705 aaPredicted RBP12.16□□□□□ -0.46
TTC39B-205ENST00000506891 PGBD5Q8N414 524 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 FSTL5Q8N475 847 aaPredicted RBP12.16□□□□□ -0.46
TTC39B-205ENST00000506891 RNF10Q8N5U6 811 aaKnown RBP12.16□□□□□ -0.46
TTC39B-205ENST00000506891 PAF1Q8N7H5 531 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 ZNF548Q8NEK5 533 aaPredicted RBP12.16□□□□□ -0.46
TTC39B-205ENST00000506891 KIAA1524Q8TCG1 905 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 SCG3Q8WXD2 468 aaKnown RBP12.16□□□□□ -0.46
TTC39B-205ENST00000506891 APOLD1Q96LR9 279 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 LYSMD1Q96S90 227 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 FERMT1Q9BQL6 677 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 NRSN2Q9GZP1 204 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 RBM22Q9NW64 420 aaKnown RBP eCLIP12.16□□□□□ -0.46
TTC39B-205ENST00000506891 SHROOM3Q8TF72 1996 aa12.16□□□□□ -0.46
TTC39B-205ENST00000506891 MIF4GDA9UHW6 222 aaKnown RBP12.15□□□□□ -0.46
TTC39B-205ENST00000506891 HACD1B0YJ81 288 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 LMO7DNF2Z398 122 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 TAF4O00268 1085 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 TNFRSF10CO14798 259 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 FFAR2O15552 330 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 RECQL5O94762 991 aaPredicted RBP12.15□□□□□ -0.46
TTC39B-205ENST00000506891 TNFP01375 233 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 VIPR1P32241 457 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 SLC10A2Q12908 348 aaPredicted RBP12.15□□□□□ -0.46
TTC39B-205ENST00000506891 RALGDSQ12967 914 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 TARDBPQ13148 414 aaKnown RBP eCLIP12.15□□□□□ -0.46
TTC39B-205ENST00000506891 XRCC4Q13426 336 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 NFATC4Q14934 902 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 IRF4Q15306 451 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 ELOCQ15369 112 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 TPRG1LQ5T0D9 272 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 ESRP1Q6NXG1 681 aaKnown RBP12.15□□□□□ -0.46
TTC39B-205ENST00000506891 BBS12Q6ZW61 710 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 TMEM139Q8IV31 216 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 PHACTR4Q8IZ21 702 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 CCNYQ8ND76 341 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 LMX1AQ8TE12 382 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 GRAMD1AQ96CP6 724 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 SEMA3CQ99985 751 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 ADGRE3Q9BY15 652 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 TSGA10Q9BZW7 698 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 CDH19Q9H159 772 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 NT5MQ9NPB1 228 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 APOBEC3BQ9UH17 382 aaKnown RBP12.15□□□□□ -0.46
TTC39B-205ENST00000506891 PCDHGC4Q9Y5F7 938 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 PCDHA3Q9Y5H8 950 aa12.15□□□□□ -0.46
TTC39B-205ENST00000506891 EME2A4GXA9 379 aaPredicted RBP12.14□□□□□ -0.47
TTC39B-205ENST00000506891 RGSL1A5PLK6 1076 aa12.14□□□□□ -0.47
TTC39B-205ENST00000506891 FAM149AA5PLN7 773 aa12.14□□□□□ -0.47
TTC39B-205ENST00000506891 APOC4-APOC2K7ER74 178 aa12.14□□□□□ -0.47
TTC39B-205ENST00000506891 CACNB4O00305 520 aaPredicted RBP12.14□□□□□ -0.47
TTC39B-205ENST00000506891 NRDCO43847 1150 aa12.14□□□□□ -0.47
TTC39B-205ENST00000506891 HEXIM1O94992 359 aaKnown RBP12.14□□□□□ -0.47
TTC39B-205ENST00000506891 RASGRP1O95267 797 aa12.14□□□□□ -0.47
TTC39B-205ENST00000506891 MT-CO3P00414 261 aa12.14□□□□□ -0.47
TTC39B-205ENST00000506891 APOC2P02655 101 aa12.14□□□□□ -0.47
TTC39B-205ENST00000506891 ANXA6P08133 673 aa12.14□□□□□ -0.47
TTC39B-205ENST00000506891 ALPIP09923 528 aa12.14□□□□□ -0.47
TTC39B-205ENST00000506891 CTNNA2P26232 953 aa12.14□□□□□ -0.47
TTC39B-205ENST00000506891 HK3P52790 923 aa12.14□□□□□ -0.47
TTC39B-205ENST00000506891 KIAA1024LP59773 190 aa12.14□□□□□ -0.47
TTC39B-205ENST00000506891 INSM1Q01101 510 aaPredicted RBP12.14□□□□□ -0.47
TTC39B-205ENST00000506891 DPTQ07507 201 aa12.14□□□□□ -0.47
TTC39B-205ENST00000506891 ARHGEF7Q14155 803 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms