RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 GSTA5Q7RTV2 222 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 ABI3BPQ7Z7G0 1075 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 CAMK1DQ8IU85 385 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 CCNJLQ8IV13 435 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 TBC1D3Q8IZP1 549 aaPredicted RBP8.49□□□□□ -1.05
PDGFC-205ENST00000506880 FAM160A2Q8N612 972 aaPredicted RBP8.49□□□□□ -1.05
PDGFC-205ENST00000506880 PAF1Q8N7H5 531 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 FAM71DQ8N9W8 422 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 C1orf216Q8TAB5 229 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 GABPB2Q8TAK5 448 aaPredicted RBP8.49□□□□□ -1.05
PDGFC-205ENST00000506880 BRSK1Q8TDC3 778 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 HEXDCQ8WVB3 486 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 RANBP9Q96S59 729 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 HERPUD2Q9BSE4 406 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 TMEM121Q9BTD3 319 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 NAT9Q9BTE0 207 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 GPR174Q9BXC1 333 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 NUSAP1Q9BXS6 441 aaKnown RBP8.49□□□□□ -1.05
PDGFC-205ENST00000506880 SLC17A9Q9BYT1 436 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 TPSD1Q9BZJ3 242 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 FOXP3Q9BZS1 431 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 XAB2Q9HCS7 855 aaKnown RBP8.49□□□□□ -1.05
PDGFC-205ENST00000506880 GPR27Q9NS67 375 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 PKD2L2Q9NZM6 624 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 SEPT10Q9P0V9 454 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 SLC6A14Q9UN76 642 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 PCDHGB2Q9Y5G2 931 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 DOCK9Q9BZ29 2069 aa8.49□□□□□ -1.05
PDGFC-205ENST00000506880 SCN8AQ9UQD0 1980 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 C2orf81A6NN90 581 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 A6NNZ2 444 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 E7EVH7 732 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 H7C0S8 307 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 FPGTO14772 594 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 WNT9AO14904 365 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 PCDH8O95206 1070 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 CER1O95813 267 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 IGHV4-34P06331 123 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 GSTM1P09488 218 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 NFKB1P19838 968 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 CXCR5P32302 372 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 TRIM23P36406 574 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 PPARGP37231 505 aaPredicted RBP8.48□□□□□ -1.05
PDGFC-205ENST00000506880 NPY2RP49146 381 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 BLKP51451 505 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 STC1P52823 247 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 GSTM4Q03013 218 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 CAV1Q03135 178 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 NIPAL4Q0D2K0 466 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 PTK6Q13882 451 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 STAT4Q14765 748 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 LRRC14Q15048 493 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 TAF1AQ15573 450 aaPredicted RBP8.48□□□□□ -1.05
PDGFC-205ENST00000506880 INAVAQ3KP66 663 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 TSSK4Q6SA08 328 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 SYT10Q6XYQ8 523 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 CEP112Q8N8E3 955 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 COG1Q8WTW3 980 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 BIRC7Q96CA5 298 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 RMDN1Q96DB5 314 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 LRRC39Q96DD0 335 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 DTD2Q96FN9 168 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 EXOC2Q96KP1 924 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 MRGPRX2Q96LB1 330 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 COQ10AQ96MF6 247 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 HSPA12BQ96MM6 686 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 RBM15Q96T37 977 aaKnown RBP eCLIP8.48□□□□□ -1.05
PDGFC-205ENST00000506880 ZSCAN5AQ9BUG6 496 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 IL22Q9GZX6 179 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 RAB17Q9H0T7 212 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 RMI1Q9H9A7 625 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 ZFYVE1Q9HBF4 777 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 MRM3Q9HC36 420 aaKnown RBP8.48□□□□□ -1.05
PDGFC-205ENST00000506880 APPL1Q9UKG1 709 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 R3HDM2Q9Y2K5 976 aaKnown RBP8.48□□□□□ -1.05
PDGFC-205ENST00000506880 TTLL3Q9Y4R7 772 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 PCDHGC4Q9Y5F7 938 aa8.48□□□□□ -1.05
PDGFC-205ENST00000506880 TP53BP1Q12888 1972 aaPredicted RBP8.48□□□□□ -1.05
PDGFC-205ENST00000506880 PCNX2A6NKB5 2137 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 ZFHX2Q9C0A1 2572 aaPredicted RBP8.47□□□□□ -1.05
PDGFC-205ENST00000506880 A0A1W2PQU0 124 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 TCRBV7S2A1N4TA0A589 114 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 HEATR9A2RTY3 570 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 PRR23AA6NEV1 266 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 KHNYNO15037 678 aaKnown RBP8.47□□□□□ -1.05
PDGFC-205ENST00000506880 KCNJ13O60928 360 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 PIGNO95427 931 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 PSMB4P28070 264 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 HTR1BP28222 390 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 CD38P28907 300 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 MPLP40238 635 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 ABL2P42684 1182 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 RXRGP48443 463 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 DHPSP49366 369 aaPredicted RBP8.47□□□□□ -1.05
PDGFC-205ENST00000506880 KIAA1024LP59773 190 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 MAXP61244 160 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 DMWDQ09019 674 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 ITGA9Q13797 1035 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 MORF4L2Q15014 288 aa8.47□□□□□ -1.05
PDGFC-205ENST00000506880 QPCTQ16769 361 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms