RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 SLC25A52Q3SY17 297 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 THOC7Q6I9Y2 204 aaKnown RBP17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 RPS27LQ71UM5 84 aaKnown RBP17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 TTC30BQ8N4P2 665 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 LEMD2Q8NC56 503 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 MTMR14Q8NCE2 650 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 ERLEC1Q96DZ1 483 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 BEGAINQ9BUH8 593 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 SMARCAD1Q9H4L7 1026 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 MAGEE1Q9HCI5 957 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 HMG20AQ9NP66 347 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 AKIP1Q9NQ31 210 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 SACM1LQ9NTJ5 587 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 GMIPQ9P107 970 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 ST14Q9Y5Y6 855 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 A0A0G2JMZ2 1700 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 LRRC37A2A6NM11 1700 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 FNDC1Q4ZHG4 1894 aaPredicted RBP17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 A0A0J9YYE9 177 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 TCRBV5S2A0A599 114 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 A8MT66 165 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 IPO13O94829 963 aaKnown RBP17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 EIF2S1P05198 315 aaKnown RBP17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 LEPRP48357 1165 aaKnown RBP17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 SULT1E1P49888 294 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 TAS2R39P59534 338 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 STX1BP61266 288 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 YBX1P67809 324 aaKnown RBP17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 CDH17Q12864 832 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 CTBP1Q13363 440 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 AQP6Q13520 282 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 SPCS2Q15005 226 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 CYP51A1Q16850 503 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 TECRLQ5HYJ1 363 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 OTUD1Q5VV17 481 aaPredicted RBP17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 ARHGAP17Q68EM7 881 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 SLC7A5P1Q8MH63 180 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 PARP8Q8N3A8 854 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 SEPT1Q8WYJ6 367 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 HPS1Q92902 700 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 CCDC126Q96EE4 140 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 MAGED4Q96JG8 741 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 MUS81Q96NY9 551 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 WDR12Q9GZL7 423 aaKnown RBP17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 CYP4F12Q9HCS2 524 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 MYOZ2Q9NPC6 264 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 IGSF5Q9NSI5 407 aa17.15■□□□□ 0.34
SQSTM1-211ENST00000506690 TGM1P22735 817 aa17.14■□□□□ 0.33
SQSTM1-211ENST00000506690 GSTM2P28161 218 aa17.14■□□□□ 0.33
SQSTM1-211ENST00000506690 GSSP48637 474 aa17.14■□□□□ 0.33
SQSTM1-211ENST00000506690 TKTL1P51854 596 aa17.14■□□□□ 0.33
SQSTM1-211ENST00000506690 TNFAIP2Q03169 654 aa17.14■□□□□ 0.33
SQSTM1-211ENST00000506690 SPATS1Q496A3 300 aa17.14■□□□□ 0.33
SQSTM1-211ENST00000506690 TFAP2DQ7Z6R9 452 aa17.14■□□□□ 0.33
SQSTM1-211ENST00000506690 FAM35AQ86V20 835 aa17.14■□□□□ 0.33
SQSTM1-211ENST00000506690 EXOC8Q8IYI6 725 aa17.14■□□□□ 0.33
SQSTM1-211ENST00000506690 CTRCQ99895 268 aa17.14■□□□□ 0.33
SQSTM1-211ENST00000506690 LPIN3Q9BQK8 851 aa17.14■□□□□ 0.33
SQSTM1-211ENST00000506690 TEX13BQ9BXU2 312 aa17.14■□□□□ 0.33
SQSTM1-211ENST00000506690 ATP6AP2A0A1C7CYW4 349 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 EEF2KO00418 725 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 NR5A2O00482 541 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 BCAS1O75363 584 aaPredicted RBP17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 ATP6AP2O75787 350 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 NFKB1P19838 968 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 CAPN3P20807 821 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 BST2Q10589 180 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 PERM1Q5SV97 790 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 TBPL2Q6SJ96 375 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 TBC1D21Q8IYX1 336 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 DEFB106AQ8N104 65 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 DNERQ8NFT8 737 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 SCN1AP35498 2009 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 UBFD1O14562 309 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 INPP4BO15327 924 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 MT-CO1P00395 513 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 EEF1DP29692 281 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 IFITM3Q01628 133 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 OCA2Q04671 838 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 CAPRIN1Q14444 709 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 FAM83EQ2M2I3 478 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 UGT3A2Q3SY77 523 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 VPS26BQ4G0F5 336 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 FAM219BQ5XKK7 198 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 LINC00299Q6ZSB3 139 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 SLC16A12Q6ZSM3 486 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 BNIPLQ7Z465 357 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 PTCD2Q8WV60 388 aaKnown RBP17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 C3orf30Q96M34 536 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 MUC13Q9H3R2 512 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 TRHDEQ9UKU6 1024 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 PCDHA9Q9Y5H5 950 aa17.13■□□□□ 0.33
SQSTM1-211ENST00000506690 AP3B1O00203 1094 aa17.12■□□□□ 0.33
SQSTM1-211ENST00000506690 ALBP02768 609 aa17.12■□□□□ 0.33
SQSTM1-211ENST00000506690 CRHBPP24387 322 aa17.12■□□□□ 0.33
SQSTM1-211ENST00000506690 DNAJB2P25686 324 aa17.12■□□□□ 0.33
SQSTM1-211ENST00000506690 SHMT2P34897 504 aa17.12■□□□□ 0.33
SQSTM1-211ENST00000506690 RAD23AP54725 363 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms