RNA–Protein interactions for RNA: ENST00000506563.5

CDK7-204, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-204ENST00000506563 CRTC1Q6UUV9 634 aa12.78□□□□□ -0.36
CDK7-204ENST00000506563 MAMSTRQ6ZN01 415 aa12.78□□□□□ -0.36
CDK7-204ENST00000506563 DPPA4Q7L190 304 aa12.78□□□□□ -0.36
CDK7-204ENST00000506563 LYSMD3Q7Z3D4 306 aa12.78□□□□□ -0.36
CDK7-204ENST00000506563 CAND1Q86VP6 1230 aaKnown RBP12.78□□□□□ -0.36
CDK7-204ENST00000506563 IFT20Q8IY31 132 aa12.78□□□□□ -0.36
CDK7-204ENST00000506563 FBXO25Q8TCJ0 367 aa12.78□□□□□ -0.36
CDK7-204ENST00000506563 RAB7BQ96AH8 199 aa12.78□□□□□ -0.36
CDK7-204ENST00000506563 SCRN2Q96FV2 425 aa12.78□□□□□ -0.36
CDK7-204ENST00000506563 SPACA7Q96KW9 195 aa12.78□□□□□ -0.36
CDK7-204ENST00000506563 SERPINB12Q96P63 405 aa12.78□□□□□ -0.36
CDK7-204ENST00000506563 GPR174Q9BXC1 333 aa12.78□□□□□ -0.36
CDK7-204ENST00000506563 C1QTNF1Q9BXJ1 281 aa12.78□□□□□ -0.36
CDK7-204ENST00000506563 XAB2Q9HCS7 855 aaKnown RBP12.78□□□□□ -0.36
CDK7-204ENST00000506563 COQ6Q9Y2Z9 468 aa12.78□□□□□ -0.36
CDK7-204ENST00000506563 ARL5AQ9Y689 179 aa12.78□□□□□ -0.36
CDK7-204ENST00000506563 NUMA1Q14980 2115 aa12.77□□□□□ -0.36
CDK7-204ENST00000506563 LRRC72A6NJI9 287 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 AREL1O15033 823 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 SLC7A4O43246 635 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 LZTS3O60299 673 aaPredicted RBP12.77□□□□□ -0.37
CDK7-204ENST00000506563 FSBPO95073 299 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 ELFN1P0C7U0 828 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 TDGF1P13385 188 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 LHCGRP22888 699 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 OXTRP30559 389 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 CARSP49589 748 aaKnown RBP12.77□□□□□ -0.37
CDK7-204ENST00000506563 LIG3P49916 1009 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 ARL4CP56559 192 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 PPP2CBP62714 309 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 PPP2CAP67775 309 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 TMPRSS15P98073 1019 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 DHX9Q08211 1270 aaKnown RBP12.77□□□□□ -0.37
CDK7-204ENST00000506563 RALGDSQ12967 914 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 PTPRCAPQ14761 206 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 CNGA3Q16281 694 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 HIF1AQ16665 826 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 MAP7D1Q3KQU3 841 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 SEL1L3Q68CR1 1132 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 ZDHHC24Q6UX98 284 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 GSPT2Q8IYD1 628 aaKnown RBP12.77□□□□□ -0.37
CDK7-204ENST00000506563 MPP5Q8N3R9 675 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 MCUQ8NE86 351 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 PPHLN1Q8NEY8 458 aaKnown RBP12.77□□□□□ -0.37
CDK7-204ENST00000506563 SNX19Q92543 992 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 ART4Q93070 314 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 MCCC1Q96RQ3 725 aaPredicted RBP12.77□□□□□ -0.37
CDK7-204ENST00000506563 C6orf106Q9H6K1 298 aaPredicted RBP12.77□□□□□ -0.37
CDK7-204ENST00000506563 ANKZF1Q9H8Y5 726 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 ZFYVE1Q9HBF4 777 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 SGK2Q9HBY8 427 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 ARNT2Q9HBZ2 717 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 BPIFA1Q9NP55 256 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 SYBUQ9NX95 663 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.77□□□□□ -0.37
CDK7-204ENST00000506563 BFARQ9NZS9 450 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 MBD1Q9UIS9 605 aaPredicted RBP12.77□□□□□ -0.37
CDK7-204ENST00000506563 NFU1Q9UMS0 254 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 KCTD3Q9Y597 815 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 MAD1L1Q9Y6D9 718 aa12.77□□□□□ -0.37
CDK7-204ENST00000506563 A0A1W2PQU0 124 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 IGLON5A6NGN9 336 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 TP73O15350 636 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 TSPAN6O43657 245 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 C1SP09871 688 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 SP9P0CG40 484 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 C6P13671 934 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 BCKDHBP21953 392 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 NPY2RP49146 381 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 SUOXP51687 545 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 DRG2P55039 364 aaKnown RBP12.76□□□□□ -0.37
CDK7-204ENST00000506563 RPL6Q02878 288 aaKnown RBP12.76□□□□□ -0.37
CDK7-204ENST00000506563 CAV1Q03135 178 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 PDIA2Q13087 525 aaKnown RBP12.76□□□□□ -0.37
CDK7-204ENST00000506563 NAA30Q147X3 362 aaPredicted RBP12.76□□□□□ -0.37
CDK7-204ENST00000506563 SMAD1Q15797 465 aaKnown RBP12.76□□□□□ -0.37
CDK7-204ENST00000506563 TMEM52BQ4KMG9 183 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 MSS51Q4VC12 460 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 DNAJC21Q5F1R6 531 aaKnown RBP12.76□□□□□ -0.37
CDK7-204ENST00000506563 ALS2CLQ60I27 953 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 CES3Q6UWW8 571 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 LIPIQ6XZB0 460 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 ARMCX6Q7L4S7 300 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 HSD11B1LQ7Z5J1 315 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 WDR5BQ86VZ2 330 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 LONP2Q86WA8 852 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 ANKMY2Q8IV38 441 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 PDIK1LQ8N165 341 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 OR2T34Q8NGX1 318 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 SPOCK2Q92563 424 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 MYOCQ99972 504 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 LRFN3Q9BTN0 628 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 MAGEE1Q9HCI5 957 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 PREBQ9HCU5 417 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 SAYSD1Q9NPB0 183 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 GDF3Q9NR23 364 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 WSB2Q9NYS7 404 aaPredicted RBP12.76□□□□□ -0.37
CDK7-204ENST00000506563 HACD3Q9P035 362 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 SAMD15Q9P1V8 674 aa12.76□□□□□ -0.37
CDK7-204ENST00000506563 CD84Q9UIB8 345 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms